title: Change in nutritional status modulates the abundance of critical pre-initiation intermediate complexes during translation initiation in vivo.
abstract: In eukaryotic translation initiation, eIF2GTP-Met-tRNA(i)(Met) ternary complex (TC) interacts with eIF3-eIF1-eIF5 complex to form the multifactor complex (MFC), while eIF2GDP associates with eIF2B for guanine nucleotide exchange. Gcn2p phosphorylates eIF2 to inhibit eIF2B. Here we evaluate the abundance of eIFs and their pre-initiation intermediate complexes in gcn2 deletion mutant grown under different conditions. We show that ribosomes are three times as abundant as eIF1, eIF2 and eIF5, while eIF3 is half as abundant as the latter three and hence, the limiting component in MFC formation. By quantitative immunoprecipitation, we estimate that approximately 15% of the cellular eIF2 is found in TC during rapid growth in a complex rich medium. Most of the TC is found in MFC, and important, approximately 40% of the total eIF2 is associated with eIF5 but lacks tRNA(i)(Met). When the gcn2Delta mutant grows less rapidly in a defined complete medium, TC abundance increases threefold without altering the abundance of each individual factor. Interestingly, the TC increase is suppressed by eIF5 overexpression and Gcn2p expression. Thus, eIF2B-catalyzed TC formation appears to be fine-tuned by eIF2 phosphorylation and the novel eIF2/eIF5 complex lacking tRNA(i)(Met).
authors.affiliation: Molecular Cellular and Developmental Biology Program, Division of Biology, Kansas State University, Manhattan, KS 66506, USA.
authors.forename: Chingakham Ranjit
authors.initials: CR
authors.lastname: Singh
authors.forename: Tsuyoshi
authors.initials: T
authors.lastname: Udagawa
authors.forename: Bumjun
authors.initials: B
authors.lastname: Lee
authors.forename: Sarah
authors.initials: S
authors.lastname: Wassink
authors.forename: Hui
authors.initials: H
authors.lastname: He
authors.forename: Yasufumi
authors.initials: Y
authors.lastname: Yamamoto
authors.forename: James T
authors.initials: JT
authors.lastname: Anderson
authors.forename: Graham D
authors.initials: GD
authors.lastname: Pavitt
authors.forename: Katsura
authors.initials: K
authors.lastname: Asano
mesh_terms: D003470:Culture Media; D015852:Eukaryotic Initiation Factor-2 / Q000378:metabolism; D040061:Eukaryotic Initiation Factor-5 / Q000378:metabolism; D006153:Guanosine Diphosphate / Q000378:metabolism; D006160:Guanosine Triphosphate / Q000031:analogs & derivatives / Q000378:metabolism; D010442:Peptide Chain Initiation, Translational; D014176:Protein Biosynthesis; D012358:RNA, Transfer, Met / Q000378:metabolism; D012270:Ribosomes / Q000378:metabolism; D012441:Saccharomyces cerevisiae / Q000378:metabolism*; D029701:Saccharomyces cerevisiae Proteins / Q000378:metabolism*
chemical_list: D003470:Culture Media; D015852:Eukaryotic Initiation Factor-2; D040061:Eukaryotic Initiation Factor-5; D012358:RNA, Transfer, Met; D029701:Saccharomyces cerevisiae Proteins; D006153:Guanosine Diphosphate; D006160:Guanosine Triphosphate