title: Complete sequence of the mitochondrial genome of Taenia saginata: comparison with T. solium and T. asiatica.
abstract: The complete sequence of the Taenia saginata mitochondrial genome was determined, and its organization and structure were compared to other human-tropic Taenia tapeworms for which complete mitochondrial sequence data were available. The mitochondrial genome was 13,670 bp long, contained 12 protein-coding genes, two ribosomal RNAs (rRNAs, a small and a large subunit), and 22 transfer RNAs (tRNAs). It did not encode the atp8 gene. Overlapping regions were found between nad4L and nad4, nad1 and trnN, and cox1 and trnT. The ATG initiation codon was used for 10 protein-coding genes, and the GTG initiation codon was used for the remaining 2 genes (nad4 and atp6). The size of the protein-coding genes of the three human Taenia tapeworms did not vary, except for Taenia solium nad1 (891 aa) and nad4 (1212 aa) and Taenia asiatica cox2 (576 aa). The tRNA genes were 57-75 bp long, and the predicted secondary structures of 18 of these genes had typical clover-leaf shapes with paired dihydrouridine (DHU) arms. The genes in all human Taenia tapeworms for the two mitochondrial rRNA subunits rrnL and rrnS are separated by trnC. The putative T. saginata rrnL and rrnS are 972 and 732 bp long, respectively. The non-coding regions of the mt genome of T. saginata consisted of 2 regions: a short non-coding region (SNR, 66 nucleotides) and a long non-coding region (LNR, 159 nucleotides). The overall sequence difference in the full mitochondrial genome between T. saginata and T. asiatica was 4.6%, while T. solium differed by 11%. In conclusion, the complete sequence of the T. saginata mitochondrial genome will serve as a resource for comparative mitochondrial genomics and systematic studies of the parasitic cestodes.
authors.affiliation: Department of Parasitology and Medical Research Institute, Chungbuk National University College of Medicine, Gaeshin-Dong, Chongju, Chungbuk 361-763, South Korea.
authors.forename: Hyeong-Kyu
authors.initials: HK
authors.lastname: Jeon
authors.forename: Kyu-Heon
authors.initials: KH
authors.lastname: Kim
authors.forename: Keeseon S
authors.initials: KS
authors.lastname: Eom
mesh_terms: D000818:Animals; D004272:DNA, Mitochondrial / Q000235:genetics*; D016678:Genome; D015801:Helminth Proteins / Q000235:genetics; D006801:Humans; D008969:Molecular Sequence Data; D017422:Sequence Analysis, DNA; D013621:Taenia / Q000145:classification / Q000235:genetics*; D041202:Taenia saginata / Q000145:classification* / Q000235:genetics*; D041201:Taenia solium / Q000145:classification / Q000235:genetics*; D013622:Taeniasis / Q000469:parasitology
chemical_list: D004272:DNA, Mitochondrial; D015801:Helminth Proteins