title: CAPS markers specific to Eb, Ee, and R genomes in the tribe Triticeae.
abstract: Wild Triticeae grasses serve as important gene pools for forage and cereal crops. Understanding their genome compositions is pivotal for efficient use of this vast gene pool in germplasm-enhancement programs. Several cleaved amplified polymorphic sequence (CAPS) markers were developed to distinguish the Eb, Ee, and R genomes. With the aid of disomic addition lines of wheat, it was confirmed that all 7 chromosomes of Eb, Ee, and R genomes carry these genome-specific CAPS markers. Thus, the identified CAPS markers are useful in detecting and monitoring the chromosomes of these 3 genomes. This study also provides evidence suggesting that some Purdue and Chinese germplasm lines developed for barley yellow dwarf virus (BYDV) resistance are different from those developed in Australia. Furthermore, Thinopyrum intermedium and Thinopyrum ponticum were shown to have different genome constitutions. Sequence analyses of the 1272 bp sequences, containing Ty3/gypsy retrotransposons, from the Eb, Ee, and R genomes also shed light on the evolution of these 3 genomes.
authors.affiliation: State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.
authors.forename: X-M
authors.initials: XM
authors.lastname: Li
authors.forename: B S
authors.initials: BS
authors.lastname: Lee
authors.forename: A C
authors.initials: AC
authors.lastname: Mammadov
authors.forename: B-C
authors.initials: BC
authors.lastname: Koo
authors.forename: I W
authors.initials: IW
authors.lastname: Mott
authors.forename: R R-C
authors.initials: RR
authors.lastname: Wang
mesh_terms: D001483:Base Sequence; D019143:Evolution, Molecular; D005819:Genetic Markers; D018745:Genome, Plant; D008969:Molecular Sequence Data; D006109:Poaceae / Q000145:classification / Q000235:genetics*; D011110:Polymorphism, Genetic; D019105:Random Amplified Polymorphic DNA Technique
chemical_list: D005819:Genetic Markers