title: Genetic linkages of the circadian clock-associated genes, TOC1, CCA1 and LHY, in the photoperiodic control of flowering time in Arabidopsis thaliana.
abstract: In Arabidopsis thaliana, the flowering time is regulated through the circadian clock that measures day-length and modulates the photoperiodic CO-FT output pathway in accordance with the external coincidence model. Nevertheless, the genetic linkages between the major clock-associated TOC1, CCA1 and LHY genes and the canonical CO-FT flowering pathway are less clear. By employing a set of mutants including an extremely early flowering toc1 cca1 lhy triple mutant, here we showed that CCA1 and LHY act redundantly as negative regulators of the photoperiodic flowering pathway. The partly redundant CCA1/LHY functions are largely, but not absolutely, dependent on the upstream TOC1 gene that serves as an activator. The results of examination with reference to the expression profiles of CO and FT in the mutants indicated that this clock circuitry is indeed linked to the CO-FT output pathway, if not exclusively. For this linkage, the phase control of certain flowering-associated genes, GI, CDF1 and FKF1, appears to be crucial. Furthermore, the genetic linkage between TOC1 and CCA1/LHY is compatible with the negative and positive feedback loop, which is currently believed to be a core of the circadian clock. The results of this study suggested that the circadian clock might open an exit for a photoperiodic output pathway during the daytime. In the context of the current clock model, these results will be discussed in connection with the previous finding that the same clock might open an exit for the early photomorphogenic output pathway during the night-time.
authors.affiliation: Laboratory of Molecular Microbiology, School of Agriculture, Nagoya University, Chikusa-ku, Nagoya, 464-8601 Japan.
authors.forename: Yusuke
authors.initials: Y
authors.lastname: Niwa
authors.forename: Shogo
authors.initials: S
authors.lastname: Ito
authors.forename: Norihito
authors.initials: N
authors.lastname: Nakamichi
authors.forename: Tsuyoshi
authors.initials: T
authors.lastname: Mizoguchi
authors.forename: Kanae
authors.initials: K
authors.lastname: Niinuma
authors.forename: Takafumi
authors.initials: T
authors.lastname: Yamashino
authors.forename: Takeshi
authors.initials: T
authors.lastname: Mizuno
mesh_terms: D017360:Arabidopsis / Q000235:genetics / Q000254:growth & development / Q000502:physiology*; D029681:Arabidopsis Proteins / Q000235:genetics* / Q000378:metabolism; D002940:Circadian Rhythm / Q000235:genetics*; D004268:DNA-Binding Proteins / Q000235:genetics* / Q000378:metabolism; D035264:Flowers / Q000254:growth & development*; D008040:Genetic Linkage / Q000235:genetics; D009154:Mutation; D017440:Photoperiod; D012097:Repressor Proteins / Q000235:genetics / Q000378:metabolism; D013997:Time Factors; D014157:Transcription Factors / Q000235:genetics* / Q000378:metabolism
chemical_list: D029681:Arabidopsis Proteins; C114425:CCA1 protein, Arabidopsis; C502170:CDF1 protein, Arabidopsis; D004268:DNA-Binding Proteins; C410504:FKF1 protein, Arabidopsis; C121183:GI protein, Arabidopsis; C113192:LHY protein, Arabidopsis; D012097:Repressor Proteins; C411822:TOC1 protein, Arabidopsis; D014157:Transcription Factors