MAnGO: an interactive R-based tool for two-colour microarray analysis.
MAnGO (Microarray Analysis at the Gif/Orsay platform) is an interactive R-based tool for the analysis of two-colour microarray experiments. It is a compilation of various methods, which allows the user (1) to control data quality by detecting biases with a large number of visual representations, (2) to pre-process data (filtering and normalization) and (3) to carry out differential analyses. MAnGO is not only a 'turn-key' tool, oriented towards biologists but also a flexible and adaptable R script oriented towards bioinformaticians.


BACKGROUND
http://bioinfome.cgm.cnrs-gif.fr/.
Marisa
Laetitia
L
Centre de Génétique Moléculaire, CNRS UPR2167 and Gif/Orsay DNA Microarray Platform, 91190 Gif-sur-Yvette, France.
Ichanté
Jean-Laurent
JL
Reymond
Nancie
N
Aggerbeck
Lawrence
L
Delacroix
Hervé
H
Mucchielli-Giorgi
Marie-Hélène
MH
D000465:Algorithms; D007089:Image Enhancement / Q000379:methods*; D007090:Image Interpretation, Computer-Assisted / Q000379:methods*; D017404:In Situ Hybridization, Fluorescence / Q000379:methods; D036641:Microscopy, Fluorescence, Multiphoton / Q000379:methods*; D020411:Oligonucleotide Array Sequence Analysis / Q000379:methods*; D011381:Programming Languages; D012984:Software; D014584:User-Computer Interface