Mammalian genome projects reveal new growth hormone (GH) sequences. Characterization of the GH-encoding genes of armadillo (Dasypus novemcinctus), hedgehog (Erinaceus europaeus), bat (Myotis lucifugus), hyrax (Procavia capensis), shrew (Sorex araneus), ground squirrel (Spermophilus tridecemlineatus), elephant (Loxodonta africana), cat (Felis catus) and opossum (Monodelphis domestica).
Mammalian growth hormone (GH) sequences have been shown previously to display episodic evolution: the sequence is generally strongly conserved but on at least two occasions during mammalian evolution (on lineages leading to higher primates and ruminants) bursts of rapid evolution occurred. However, the number of mammalian orders studied previously has been relatively limited, and the availability of sequence data via mammalian genome projects provides the potential for extending the range of GH gene sequences examined. Complete or nearly complete GH gene sequences for six mammalian species for which no data were previously available have been extracted from the genome databases-Dasypus novemcinctus (nine-banded armadillo), Erinaceus europaeus (western European hedgehog), Myotis lucifugus (little brown bat), Procavia capensis (cape rock hyrax), Sorex araneus (European shrew), Spermophilus tridecemlineatus (13-lined ground squirrel). In addition incomplete data for several other species have been extended. Examination of the data in detail and comparison with previously available sequences has allowed assessment of the reliability of deduced sequences. Several of the new sequences differ substantially from the consensus sequence previously determined for eutherian GHs, indicating greater variability than previously recognised, and confirming the episodic pattern of evolution. The episodic pattern is not seen for signal sequences, 5' upstream sequence or synonymous substitutions-it is specific to the mature protein sequence, suggesting that it relates to the hormonal function. The substitutions accumulated during the course of GH evolution have occurred mainly on the side of the hormone facing away from the receptor, in a non-random fashion, and it is suggested that this may reflect interaction of the receptor-bound hormone with other proteins or small ligands.
Wallis
Michael
M
Biochemistry Department, School of Life Sciences, University of Sussex, Falmer, Brighton, Sussex BN1 9QG, UK. M.Wallis@sussex.ac.uk
D000595:Amino Acid Sequence; D000818:Animals; D001135:Armadillos / Q000235:genetics; D001483:Base Sequence; D002415:Cats / Q000235:genetics; D002685:Chiroptera / Q000235:genetics; D004606:Elephants / Q000235:genetics; D019143:Evolution, Molecular; D023281:Genomics; D013006:Growth Hormone / Q000235:genetics*; D006364:Hedgehogs / Q000235:genetics; D007043:Hyraxes / Q000235:genetics; D008322:Mammals / Q000235:genetics*; D008969:Molecular Sequence Data; D009893:Opossums / Q000235:genetics; D012589:Sciuridae / Q000235:genetics; D016415:Sequence Alignment; D012788:Shrews / Q000235:genetics; D013045:Species Specificity
D013006:Growth Hormone