title: Autoimmune diseases in a Danish cohort of 4,866 carriers of constitutional structural chromosomal rearrangements.
abstract: OBJECTIVE
  Constitutional structural chromosomal rearrangements (CSCRs) have facilitated the identification of genes associated with early-onset monogenic disorders and, more recently, genes associated with common and late-onset disorders. In an attempt to find genetic clues to their etiologies, we studied the risk of autoimmune diseases in a Danish cohort of CSCR carriers.
  
  
  METHODS
  We followed up 4,866 CSCR carriers over 71,230 person-years (1980 through 2004) for autoimmune diseases recorded in the Danish Hospital Discharge Register. Standardized incidence ratios (SIRs) and 95% confidence intervals (95% CIs) served as measures of the relative risk. To identify possible candidate loci for autoimmune diseases, the reported chromosomal breakpoints and deletions in CSCR carriers who developed autoimmune diseases were compared with previously suggested loci for these diseases.
  
  
  RESULTS
  The overall risk of any autoimmune disease among CSCR carriers was inconspicuous (SIR 1.2 [95% CI 0.95-1.5]; n = 74 cases observed versus 61.3 expected), but carriers of rearrangements involving chromosomes 2, 19, and 21 were at significantly increased risk. For the specific autoimmune diseases studied, cohort members were at significantly increased risk of Dupuytren's contracture, pernicious anemia, and juvenile rheumatoid arthritis (JRA). Sixteen carriers who developed an autoimmune disease had a chromosomal breakpoint or deletion coinciding with a previously suggested locus, including deletions 18p11, 18q22, and 22q11 associated with JRA.
  
  
  CONCLUSIONS
  CSCR carriers do not have a generalized predisposition to autoimmune diseases. However, we confirmed a number of reported susceptibility loci for JRA, and we suggest new susceptibility loci on chromosomes 5 and 11 for Dupuytren's contracture, and 19p13 as a possible shared susceptibility locus for a range of autoimmune diseases.
authors.affiliation: Wilhelm Johannsen Centre for Functional Genome Research, University of Copenhagen, Copenhagen, Denmark. iben@imbg.ku.dk
authors.forename: Iben
authors.initials: I
authors.lastname: Bache
authors.forename: Nete M
authors.initials: NM
authors.lastname: Nielsen
authors.forename: Klaus
authors.initials: K
authors.lastname: Rostgaard
authors.forename: Niels
authors.initials: N
authors.lastname: Tommerup
authors.forename: Morten
authors.initials: M
authors.lastname: Frisch
mesh_terms: D001327:Autoimmune Diseases / Q000453:epidemiology / Q000235:genetics*; D002869:Chromosome Aberrations; D002877:Chromosomes, Human / Q000235:genetics*; D015331:Cohort Studies; D003718:Denmark; D005260:Female; D005500:Follow-Up Studies; D015321:Gene Rearrangement; D006801:Humans; D008297:Male