title: Resolving the biodiversity paradox.
abstract: The paradox of biodiversity involves three elements, (i) mathematical models predict that species must differ in specific ways in order to coexist as stable ecological communities, (ii) such differences are difficult to identify, yet (iii) there is widespread evidence of stability in natural communities. Debate has centred on two views. The first explanation involves tradeoffs along a small number of axes, including 'colonization-competition', resource competition (light, water, nitrogen for plants, including the 'successional niche'), and life history (e.g. high-light growth vs. low-light survival and few large vs. many small seeds). The second view is neutrality, which assumes that species differences do not contribute to dynamics. Clark et al. (2004) presented a third explanation, that coexistence is inherently high dimensional, but still depends on species differences. We demonstrate that neither traditional low-dimensional tradeoffs nor neutrality can resolve the biodiversity paradox, in part by showing that they do not properly interpret stochasticity in statistical and in theoretical models. Unless sample sizes are small, traditional data modelling assures that species will appear different in a few dimensions, but those differences will rarely predict coexistence when parameter estimates are plugged into theoretical models. Contrary to standard interpretations, neutral models do not imply functional equivalence, but rather subsume species differences in stochastic terms. New hierarchical modelling techniques for inference reveal high-dimensional differences among species that can be quantified with random individual and temporal effects (RITES), i.e. process-level variation that results from many causes. We show that this variation is large, and that it stands in for species differences along unobserved dimensions that do contribute to diversity. High dimensional coexistence contrasts with the classical notions of tradeoffs along a few axes, which are often not found in data, and with 'neutral models', which mask, rather than eliminate, tradeoffs in stochastic terms. This mechanism can explain coexistence of species that would not occur with simple, low-dimensional tradeoff scenarios.
authors.affiliation: Nicholas School of the Environment, Duke University, Durham, NC 27708, USA. jimclark@duke.edu
authors.forename: James S
authors.initials: JS
authors.lastname: Clark
authors.forename: Mike
authors.initials: M
authors.lastname: Dietze
authors.forename: Sukhendu
authors.initials: S
authors.lastname: Chakraborty
authors.forename: Pankaj K
authors.initials: PK
authors.lastname: Agarwal
authors.forename: Ines
authors.initials: I
authors.lastname: Ibanez
authors.forename: Shannon
authors.initials: S
authors.lastname: LaDeau
authors.forename: Mike
authors.initials: M
authors.lastname: Wolosin
mesh_terms: D000220:Adaptation, Biological; D044822:Biodiversity; D008962:Models, Theoretical; D013045:Species Specificity; D013269:Stochastic Processes