Principal component analysis of fluorescence changes upon growth conditions and washing of Pseudomonas aeruginosa.
We have measured the autofluorescence from suspensions of Pseudomonas aeruginosa in the growth medium and after one, two, and three washes. The bacterium was grown in two different media, nutrient broth and King's B broth. The bacterium was harvested after 12, 24, and 48 h of growth. The fluorescence was measured with excitation every 10 nm from 200 nm to 600 nm. The fluorescence profiles were analyzed using principal component analysis. We found that most of the information is in the first three principal components. Stark differences in the value of the first principal component were noted between the samples in broth and those with one, two, or three washings. The second and third principal components noted differences between the samples washed once and those washed two or three times. There was no significant difference between samples washed two and three times. There are small differences noted between the samples grown in the two different broths, and no differences were noted among the samples harvested at different times.
Department of Physics and Astronomy, University of Canterbury, Christchurch, New Zealand.
Ekta
E
Jhala
Craig
C
Galilee
Lou
L
Reinisch
D000465:Algorithms; D016000:Cluster Analysis; D003470:Culture Media; D005453:Fluorescence; D055095:Optics and Photonics; D010363:Pattern Recognition, Automated; D025341:Principal Component Analysis; D011550:Pseudomonas aeruginosa / Q000378:metabolism*; D013050:Spectrometry, Fluorescence / Q000379:methods*; D013997:Time Factors
D003470:Culture Media