From bit to it: how a complex metabolic network transforms information into living matter.
BACKGROUND
Organisms live and die by the amount of information they acquire about their environment. The systems analysis of complex metabolic networks allows us to ask how such information translates into fitness. A metabolic network transforms nutrients into biomass. The better it uses information on available nutrient availability, the faster it will allow a cell to divide.


RESULTS
I here use metabolic flux balance analysis to show that the accuracy I (in bits) with which a yeast cell can sense a limiting nutrient's availability relates logarithmically to fitness as indicated by biomass yield and cell division rate. For microbes like yeast, natural selection can resolve fitness differences of genetic variants smaller than 10-6, meaning that cells would need to estimate nutrient concentrations to very high accuracy (greater than 22 bits) to ensure optimal growth. I argue that such accuracies are not achievable in practice. Natural selection may thus face fundamental limitations in maximizing the information processing capacity of cells.


CONCLUSIONS
The analysis of metabolic networks opens a door to understanding cellular biology from a quantitative, information-theoretic perspective.
Wagner
Andreas
A
Department of Biochemistry, University of Zurich, Building Y27, Winterthurerstrasse 190, CH-8057 Zurich, Switzerland. aw@bioc.uzh.ch
D018533:Biomass; D002455:Cell Division; D053858:Metabolic Networks and Pathways; D008954:Models, Biological; D012441:Saccharomyces cerevisiae / Q000166:cytology / Q000254:growth & development* / Q000378:metabolism*; D012641:Selection, Genetic; D049490:Systems Biology