title: New tools and expanded data analysis capabilities at the Protein Structure Prediction Center.
abstract: We outline the main tasks performed by the Protein Structure Prediction Center in support of the CASP7 experiment and provide a brief review of the major measures used in the automatic evaluation of predictions. We describe in more detail the software developed to facilitate analysis of modeling success over and beyond the available templates and the adopted Java-based tool enabling visualization of multiple structural superpositions between target and several models/templates. We also give an overview of the CASP infrastructure provided by the Center and discuss the organization of the results web pages available through http://predictioncenter.org.
authors: Genome Center, University of California, Davis, California 95616, USA.
authors: Andriy
authors: A
authors: Kryshtafovych
authors: Andreas
authors: A
authors: Prlic
authors: Zinoviy
authors: Z
authors: Dmytriv
authors: Pawel
authors: P
authors: Daniluk
authors: Maciej
authors: M
authors: Milostan
authors: Volker
authors: V
authors: Eyrich
authors: Tim
authors: T
authors: Hubbard
authors: Krzysztof
authors: K
authors: Fidelis
mesh_terms: D019295:Computational Biology / Q000379:methods*; D020407:Internet; D008958:Models, Molecular; D011487:Protein Conformation; D017510:Protein Folding; D011506:Proteins / Q000737:chemistry; D012984:Software; D013329:Structure-Activity Relationship
chemical_list: D011506:Proteins
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