title: The noncatalytic triad of alpha-amylases: a novel structural motif involved in conformational stability.
abstract: Chloride-activated alpha-amylases contain a noncatalytic triad, independent of the glycosidic active site, perfectly mimicking the catalytic triad of serine-proteases and of other active serine hydrolytic enzymes. Mutagenesis of Glu, His, and Ser residues in various alpha-amylases shows that this pattern is a structural determinant of the enzyme conformation that cannot be altered without losing the intrinsic stability of the protein. (1)H-(15)N NMR spectra of a bacterial alpha-amylase reveal proton signals that are identical with the NMR signature of catalytic triads and especially a deshielded proton involving a protonated histidine and displaying properties similar to that of a low barrier hydrogen bond. It is proposed that the H-bond between His and Glu of the noncatalytic triad is an unusually strong interaction, responsible for the observed NMR signal and for the weak stability of the triad mutants. Furthermore, a stringent template-based search of the Protein Data Bank demonstrated that this motif is not restricted to alpha-amylases, but is also found in 80 structures from 33 different proteins, amongst which SH2 domain-containing proteins are the best representatives.
authors.affiliation: Laboratory of Biochemistry, University of Liège, Liège, Sart-Tilman, Belgium.
authors.forename: Jean-Claude
authors.initials: JC
authors.lastname: Marx
authors.forename: Johan
authors.initials: J
authors.lastname: Poncin
authors.forename: Jean-Pierre
authors.initials: JP
authors.lastname: Simorre
authors.forename: Pramod W
authors.initials: PW
authors.lastname: Ramteke
authors.forename: Georges
authors.initials: G
authors.lastname: Feller
mesh_terms: D002384:Catalysis; D004795:Enzyme Stability; D016297:Mutagenesis, Site-Directed; D019906:Nuclear Magnetic Resonance, Biomolecular; D011487:Protein Conformation; D031161:Pseudoalteromonas / Q000201:enzymology; D000516:alpha-Amylases / Q000737:chemistry / Q000235:genetics / Q000378:metabolism*
chemical_list: D000516:alpha-Amylases