title: Validation of a quantitative PCR diagnostic method for detection of the microsporidian Ovipleistophora ovariae in the cyprinid fish Notemigonus crysoleucas.
abstract: Microsporidian parasites are easily detected by light microscopy when infections are heavy and spores are present. However, early infections without spores, or light infections with low numbers of spores, are easily missed. This limitation has made it difficult to conduct investigations into microsporidian prevalence and transmission. In this study, we developed a quantitative TaqMan polymerase chain reaction assay to assess the presence of Ovipleistophora ovariae in the tissues of the cyprinid fish Notemigonus crysoleucas (golden shiner). The efficiency of the primer set was 100.8%, with a correlation coefficient of threshold position to copy number of 0.997 over 9 logs using a plasmid containing the cloned reaction product. No product was produced from other closely related microsporidian species (Nucleospora salmonis, Pseudoloma neurophila, Glugea stephani, Heterosporis sp., and O. mirandella). The coefficient of variation for replicate assays done on different days was 12.4%. The assay detects O. ovariae reliably at less than 10 genomic copies and 0.14 spores per reaction, but maximum sensitivity is only achieved when sonication is included as part of the DNA purification step. Using the assay, we found 4.44 x 10(1) to 7.91 x 10(6) copies microg(-1) host DNA in female golden shiners, with the spore density increasing during the spawning season. The parasite was also detected for the first time in the testes of male golden shiners at 2.60 x 10(1) to 8.62 x 102 copies microg(-1) host DNA.
authors.affiliation: University of Arkansas at Pine Bluff, Aquaculture/Fisheries Center, 1200 North University Drive, Mail Slot 4912, Pine Bluff, Arkansas 71601, USA.
authors.forename: Nicholas B D
authors.initials: NB
authors.lastname: Phelps
authors.forename: Andrew E
authors.initials: AE
authors.lastname: Goodwin
mesh_terms: D000818:Animals; D001483:Base Sequence; D003530:Cyprinidae; D004271:DNA, Fungal / Q000737:chemistry / Q000235:genetics; D005260:Female; D005393:Fish Diseases / Q000175:diagnosis / Q000382:microbiology*; D008297:Male; D016814:Microsporidia / Q000235:genetics* / Q000302:isolation & purification; D016881:Microsporidiosis / Q000175:diagnosis / Q000382:microbiology / Q000662:veterinary*; D008969:Molecular Sequence Data; D016133:Polymerase Chain Reaction / Q000379:methods / Q000662:veterinary*; D012680:Sensitivity and Specificity; D016415:Sequence Alignment; D013172:Spores, Fungal / Q000235:genetics / Q000302:isolation & purification