title: Mass spectrometric approaches for elucidation of antigenantibody recognition structures in molecular immunology.
abstract: Mass spectrometric approaches have recently gained increasing access to molecular immunology and several methods have been developed that enable detailed chemical structure identification of antigen-antibody interactions. Selective proteolytic digestion and MS-peptide mapping (epitope excision) has been successfully employed for epitope identification of protein antigens. In addition, "affinity proteomics" using partial epitope excision has been developed as an approach with unprecedented selectivity for direct protein identification from biological material. The potential of these methods is illustrated by the elucidation of a beta-amyloid plaque-specific epitope recognized by therapeutic antibodies from transgenic mouse models of Alzheimer's disease. Using an immobilized antigen and antibody-proteolytic digestion and analysis by high resolution Fourier transform ion cyclotron resonance mass spectrometry has lead to a new approach for the identification of antibody paratope structures (paratope-excision; "parex-prot"). In this method, high resolution MS-peptide data at the low ppm level are required for direct identification of paratopes using protein databases. Mass spectrometric epitope mapping and determination of "molecular antibody-recognition signatures" offer high potential, especially for the development of new molecular diagnostics and the evaluation of new vaccine lead structures.
authors: University of Konstanz, Department of Chemistry, Laboratory of Analytical Chemistry and Biopolymer Structure Analysis, Universitaetsstrasse 10, 78457 Konstanz, Germany.
authors: Raluca
authors: R
authors: Stefanescu
authors: Roxan E
authors: RE
authors: Iacob
authors: Eugen N
authors: EN
authors: Damoc
authors: Andreas
authors: A
authors: Marquardt
authors: Erika
authors: E
authors: Amstalden
authors: Marilena
authors: M
authors: Manea
authors: Irina
authors: I
authors: Perdivara
authors: Madalina
authors: M
authors: Maftei
authors: Gabriela
authors: G
authors: Paraschiv
authors: Michael
authors: M
authors: Przybylski
mesh_terms: D000544:Alzheimer Disease / Q000276:immunology; D000818:Animals; D000937:Antigen-Antibody Reactions / Q000235:genetics* / Q000276:immunology*; D002417:Cattle; D004195:Disease Models, Animal; D018604:Epitope Mapping; D000939:Epitopes / Q000737:chemistry / Q000276:immunology*; D007158:Immunologic Techniques; D051379:Mice; D008822:Mice, Transgenic; D008967:Molecular Biology; D017550:Spectroscopy, Fourier Transform Infrared / Q000379:methods*; D020107:Troponin T / Q000032:analysis / Q000276:immunology
chemical_list: D000939:Epitopes; D020107:Troponin T