title: Disruption of genes encoding pyruvate dehydrogenase kinases leads to retarded growth on acetate and ethanol in Saccharomyces cerevisiae.
abstract: Two open reading frames, YIL042c (PKP1) and YGL059w, with 25% sequence similarity to human pyruvate dehydrogenase kinases, were shown to have protein kinase activity. Using GFP fusions, it was demonstrated that the proteins localize in discrete submitochondrial regions. Strains with a null mutation in these loci grew poorly on acetate and ethanol as carbon sources. Doubling times increased from ca. 4 h in the wild-type to > 6 h for the mutants. Growth rates of the mutants could be restored to wild-type levels by simultaneous disruption of the PDA1 gene, encoding the E1alpha subunit of the pyruvate dehydrogenase complex. This observation and the pyruvate dehydrogenase activities measured in the mutant strains and the wild-type grown on glucose or acetate suggest that the slow growth phenotype on C2 carbon sources is caused by a futile cycle in which phosphoenolpyruvate is converted back to acetyl coenzyme A.
authors.affiliation: Institute of Biology, Leiden University, Clusius Laboratory, Wassenaarseweg 64, 2333 AL Leiden, The Netherlands. h.y.steensma@biology.leidenuniv.nl
authors.forename: H Yde
authors.initials: HY
authors.lastname: Steensma
authors.forename: Lubomir
authors.initials: L
authors.lastname: Tomaska
authors.forename: Peter
authors.initials: P
authors.lastname: Reuven
authors.forename: Jozef
authors.initials: J
authors.lastname: Nosek
authors.forename: Raymond
authors.initials: R
authors.lastname: Brandt
mesh_terms: D000085:Acetates / Q000378:metabolism*; D004271:DNA, Fungal; D000431:Ethanol / Q000378:metabolism*; D005800:Genes, Fungal; D049452:Green Fluorescent Proteins / Q000235:genetics / Q000378:metabolism; D008856:Microscopy, Fluorescence; D008928:Mitochondria / Q000201:enzymology / Q000378:metabolism; D016254:Mutagenesis, Insertional; D016366:Open Reading Frames; D010766:Phosphorylation; D011768:Pyruvate Dehydrogenase Complex / Q000235:genetics* / Q000378:metabolism; D012441:Saccharomyces cerevisiae / Q000201:enzymology / Q000235:genetics* / Q000254:growth & development* / Q000378:metabolism; D014170:Transformation, Genetic
chemical_list: D000085:Acetates; D004271:DNA, Fungal; D011768:Pyruvate Dehydrogenase Complex; D049452:Green Fluorescent Proteins; D000431:Ethanol