title: Antarctic fish mitochondrial genomes lack ND6 gene.
abstract: Mitochondrial gene content shows extensive variation among eukaryotes, but is remarkably compact and static in bilateral animals. Mitochondrial genomes of bilaterians typically contain two rRNA, 22 tRNA, and 13 protein-coding genes. In this study, we report that the mitochondrial genomes of Antarctic fishes of the suborder Notothenioidei (Perciformes) lack two adjacent genes encoding NADH 6 dehydrogenase (ND6) and tRNA(Glu). Loss of the ND6 gene is reported for the first time in an animal mitochondrial genome, and is considered an extremely rare evolutionary event. Dot blot and ND6 transcript detection analyses found no evidence of mitochondrial ND6 gene copies in heteroplasmy or of a functional ND6 gene copy in the nuclear genome, respectively. Hence, we concluded that ND6 function was lost in Antarctic notothenioids, and could be compensated for by functional changes in other proteins of the mitochondrial respiratory system.
authors.affiliation: Department of Biology, University of Padova, via G. Colombo, 3 - 35121, Padova, Italy.
authors.forename: Chiara
authors.initials: C
authors.lastname: Papetti
authors.forename: Pietro
authors.initials: P
authors.lastname: Liò
authors.forename: Lukas
authors.initials: L
authors.lastname: Rüber
authors.forename: Tomaso
authors.initials: T
authors.lastname: Patarnello
authors.forename: Rafael
authors.initials: R
authors.lastname: Zardoya
mesh_terms: D000251:Adenosine Triphosphatases / Q000235:genetics / Q000378:metabolism; D000818:Animals; D000864:Antarctic Regions; D019143:Evolution, Molecular; D005399:Fishes / Q000145:classification / Q000235:genetics* / Q000378:metabolism; D017353:Gene Deletion; D050259:Genes, Mitochondrial / Q000235:genetics*; D054629:Genome, Mitochondrial / Q000235:genetics*; D009245:NADH Dehydrogenase / Q000145:classification / Q000172:deficiency* / Q000235:genetics*; D010802:Phylogeny; D012352:RNA, Transfer, Glu / Q000235:genetics; D017422:Sequence Analysis, DNA; D014158:Transcription, Genetic / Q000235:genetics
chemical_list: D012352:RNA, Transfer, Glu; D009245:NADH Dehydrogenase; D000251:Adenosine Triphosphatases