Dynamics of an idealized model of microtubule growth and catastrophe.
We investigate a simple dynamical model of a microtubule that evolves by attachment of guanosine triphosphate (GTP) tubulin to its end, irreversible conversion of GTP to guanosine diphosphate (GDP) tubulin by hydrolysis, and detachment of GDP at the end of a microtubule. As a function of rates of these processes, the microtubule can grow steadily or its length can fluctuate wildly. In the regime where detachment can be neglected, we find exact expressions for the tubule and GTP cap length distributions, as well as power-law length distributions of GTP and GDP islands. In the opposite limit of instantaneous detachment, we find the time between catastrophes, where the microtubule shrinks to zero length, and determine the size distribution of avalanches (sequence of consecutive GDP detachment events). We obtain the phase diagram for general rates and verify our predictions by numerical simulations.
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Program for Evolutionary Dynamics, Harvard University, Cambridge, Massachusetts 02138, USA.
Krapivsky
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PL
Redner
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Mailman
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Chakraborty
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B
D000818:Animals; D001703:Biophysics / Q000379:methods*; D003198:Computer Simulation; D006153:Guanosine Diphosphate / Q000737:chemistry; D006160:Guanosine Triphosphate / Q000737:chemistry; D006801:Humans; D007700:Kinetics; D008870:Microtubules / Q000378:metabolism*; D008954:Models, Biological; D008956:Models, Chemical; D015233:Models, Statistical; D008962:Models, Theoretical; D013997:Time Factors; D014404:Tubulin / Q000737:chemistry
D014404:Tubulin; D006153:Guanosine Diphosphate; D006160:Guanosine Triphosphate