title: Ensembl 2008.
abstract: The Ensembl project (http://www.ensembl.org) is a comprehensive genome information system featuring an integrated set of genome annotation, databases and other information for chordate and selected model organism and disease vector genomes. As of release 47 (October 2007), Ensembl fully supports 35 species, with preliminary support for six additional species. New species in the past year include platypus and horse. Major additions and improvements to Ensembl since our previous report include extensive support for functional genomics data in the form of a specialized functional genomics database, genome-wide maps of protein-DNA interactions and the Ensembl regulatory build; support for customization of the Ensembl web interface through the addition of user accounts and user groups; and increased support for genome resequencing. We have also introduced new comparative genomics-based data mining options and report on the continued development of our software infrastructure.
authors.affiliation: European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. flicek@ebi.ac.uk
authors.forename: P
authors.initials: P
authors.lastname: Flicek
authors.forename: B L
authors.initials: BL
authors.lastname: Aken
authors.forename: K
authors.initials: K
authors.lastname: Beal
authors.forename: B
authors.initials: B
authors.lastname: Ballester
authors.forename: M
authors.initials: M
authors.lastname: Caccamo
authors.forename: Y
authors.initials: Y
authors.lastname: Chen
authors.forename: L
authors.initials: L
authors.lastname: Clarke
authors.forename: G
authors.initials: G
authors.lastname: Coates
authors.forename: F
authors.initials: F
authors.lastname: Cunningham
authors.forename: T
authors.initials: T
authors.lastname: Cutts
authors.forename: T
authors.initials: T
authors.lastname: Down
authors.forename: S C
authors.initials: SC
authors.lastname: Dyer
authors.forename: T
authors.initials: T
authors.lastname: Eyre
authors.forename: S
authors.initials: S
authors.lastname: Fitzgerald
authors.forename: J
authors.initials: J
authors.lastname: Fernandez-Banet
authors.forename: S
authors.initials: S
authors.lastname: Gräf
authors.forename: S
authors.initials: S
authors.lastname: Haider
authors.forename: M
authors.initials: M
authors.lastname: Hammond
authors.forename: R
authors.initials: R
authors.lastname: Holland
authors.forename: K L
authors.initials: KL
authors.lastname: Howe
authors.forename: K
authors.initials: K
authors.lastname: Howe
authors.forename: N
authors.initials: N
authors.lastname: Johnson
authors.forename: A
authors.initials: A
authors.lastname: Jenkinson
authors.forename: A
authors.initials: A
authors.lastname: Kähäri
authors.forename: D
authors.initials: D
authors.lastname: Keefe
authors.forename: F
authors.initials: F
authors.lastname: Kokocinski
authors.forename: E
authors.initials: E
authors.lastname: Kulesha
authors.forename: D
authors.initials: D
authors.lastname: Lawson
authors.forename: I
authors.initials: I
authors.lastname: Longden
authors.forename: K
authors.initials: K
authors.lastname: Megy
authors.forename: P
authors.initials: P
authors.lastname: Meidl
authors.forename: B
authors.initials: B
authors.lastname: Overduin
authors.forename: A
authors.initials: A
authors.lastname: Parker
authors.forename: B
authors.initials: B
authors.lastname: Pritchard
authors.forename: A
authors.initials: A
authors.lastname: Prlic
authors.forename: S
authors.initials: S
authors.lastname: Rice
authors.forename: D
authors.initials: D
authors.lastname: Rios
authors.forename: M
authors.initials: M
authors.lastname: Schuster
authors.forename: I
authors.initials: I
authors.lastname: Sealy
authors.forename: G
authors.initials: G
authors.lastname: Slater
authors.forename: D
authors.initials: D
authors.lastname: Smedley
authors.forename: G
authors.initials: G
authors.lastname: Spudich
authors.forename: S
authors.initials: S
authors.lastname: Trevanion
authors.forename: A J
authors.initials: AJ
authors.lastname: Vilella
authors.forename: J
authors.initials: J
authors.lastname: Vogel
authors.forename: S
authors.initials: S
authors.lastname: White
authors.forename: M
authors.initials: M
authors.lastname: Wood
authors.forename: E
authors.initials: E
authors.lastname: Birney
authors.forename: T
authors.initials: T
authors.lastname: Cox
authors.forename: V
authors.initials: V
authors.lastname: Curwen
authors.forename: R
authors.initials: R
authors.lastname: Durbin
authors.forename: X M
authors.initials: XM
authors.lastname: Fernandez-Suarez
authors.forename: J
authors.initials: J
authors.lastname: Herrero
authors.forename: T J P
authors.initials: TJ
authors.lastname: Hubbard
authors.forename: A
authors.initials: A
authors.lastname: Kasprzyk
authors.forename: G
authors.initials: G
authors.lastname: Proctor
authors.forename: J
authors.initials: J
authors.lastname: Smith
authors.forename: A
authors.initials: A
authors.lastname: Ureta-Vidal
authors.forename: S
authors.initials: S
authors.lastname: Searle
mesh_terms: D000818:Animals; D003196:Computer Graphics; D030541:Databases, Genetic; D023281:Genomics; D006801:Humans; D020407:Internet; D051379:Mice; D050436:Regulatory Elements, Transcriptional; D012984:Software; D014584:User-Computer Interface