title: Validation of the symptom pattern method for analyzing verbal autopsy data.
abstract: BACKGROUND
  Cause of death data are a critical input to formulating good public health policy. In the absence of reliable vital registration data, information collected after death from household members, called verbal autopsy (VA), is commonly used to study causes of death. VA data are usually analyzed by physician-coded verbal autopsy (PCVA). PCVA is expensive and its comparability across regions is questionable. Nearly all validation studies of PCVA have allowed physicians access to information collected from the household members' recall of medical records or contact with health services, thus exaggerating accuracy of PCVA in communities where few deaths had any interaction with the health system. In this study we develop and validate a statistical strategy for analyzing VA data that overcomes the limitations of PCVA.
  
  
  RESULTS
  We propose and validate a method that combines the advantages of methods proposed by King and Lu, and Byass, which we term the symptom pattern (SP) method. The SP method uses two sources of VA data. First, it requires a dataset for which we know the true cause of death, but which need not be representative of the population of interest; this dataset might come from deaths that occur in a hospital. The SP method can then be applied to a second VA sample that is representative of the population of interest. From the hospital data we compute the properties of each symptom; that is, the probability of responding yes to each symptom, given the true cause of death. These symptom properties allow us first to estimate the population-level cause-specific mortality fractions (CSMFs), and to then use the CSMFs as an input in assigning a cause of death to each individual VA response. Finally, we use our individual cause-of-death assignments to refine our population-level CSMF estimates. The results from applying our method to data collected in China are promising. At the population level, SP estimates the CSMFs with 16% average relative error and 0.7% average absolute error, while PCVA results in 27% average relative error and 1.1% average absolute error. At the individual level, SP assigns the correct cause of death in 83% of the cases, while PCVA does so for 69% of the cases. We also compare the results of SP and PCVA when both methods have restricted access to the information from the medical record recall section of the VA instrument. At the population level, without medical record recall, the SP method estimates the CSMFs with 14% average relative error and 0.6% average absolute error, while PCVA results in 70% average relative error and 3.2% average absolute error. For individual estimates without medical record recall, SP assigns the correct cause of death in 78% of cases, while PCVA does so for 38% of cases.
  
  
  CONCLUSIONS
  Our results from the data collected in China suggest that the SP method outperforms PCVA, both at the population and especially at the individual level. Further study is needed on additional VA datasets in order to continue validation of the method, and to understand how the symptom properties vary as a function of culture, language, and other factors. Our results also suggest that PCVA relies heavily on household recall of medical records and related information, limiting its applicability in low-resource settings. SP does not require that additional information to adequately estimate causes of death.
authors.affiliation: Institute for Health Metrics and Evaluation, University of Washington, Seattle, Washington, United States of America. cjlm@u.washington.edu
authors.forename: Christopher J L
authors.initials: CJ
authors.lastname: Murray
authors.forename: Alan D
authors.initials: AD
authors.lastname: Lopez
authors.forename: Dennis M
authors.initials: DM
authors.lastname: Feehan
authors.forename: Shanon T
authors.initials: ST
authors.lastname: Peter
authors.forename: Gonghuan
authors.initials: G
authors.lastname: Yang
mesh_terms: D000465:Algorithms; D001344:Autopsy / Q000379:methods*; D002423:Cause of Death; D003625:Data Collection; D003627:Data Interpretation, Statistical; D014943:Global Health; D006801:Humans; D008499:Medical Records; D015233:Models, Statistical; D011634:Public Health / Q000379:methods; D015203:Reproducibility of Results; D012106:Research