MetaNetter: inference and visualization of high-resolution metabolomic networks.
CONCLUSIONS
We present a Cytoscape plugin for the inference and visualization of networks from high-resolution mass spectrometry metabolomic data. The software also provides access to basic topological analysis. This open source, multi-platform software has been successfully used to interpret metabolomic experiments and will enable others using filtered, high mass accuracy mass spectrometric data sets to build and analyse networks.


BACKGROUND
http://compbio.dcs.gla.ac.uk/fabien/abinitio/abinitio.html
Jourdan
Fabien
F
UMR1089 Xénobiotiques INRA-ENVT, 180 chemin de Tournefeuille, St-Martin-du-Touch, BP3 31931 Toulouse, France. Fabien.Jourdan@toulouse.inra.fr
Breitling
Rainer
R
Barrett
Michael P
MP
Gilbert
David
D
D003198:Computer Simulation; D020869:Gene Expression Profiling / Q000379:methods*; D008954:Models, Biological; D025941:Protein Interaction Mapping / Q000379:methods*; D020543:Proteome / Q000378:metabolism*; D015203:Reproducibility of Results; D012680:Sensitivity and Specificity; D015398:Signal Transduction / Q000502:physiology*; D012984:Software; D014584:User-Computer Interface
D020543:Proteome