TimeClust: a clustering tool for gene expression time series.
TimeClust is a user-friendly software package to cluster genes according to their temporal expression profiles. It can be conveniently used to analyze data obtained from DNA microarray time-course experiments. It implements two original algorithms specifically designed for clustering short time series together with hierarchical clustering and self-organizing maps.


BACKGROUND
TimeClust executable files for Windows and LINUX platforms can be downloaded free of charge for non-profit institutions from the following web site: http://aimed11.unipv.it/TimeClust.
Dipartimento di Informatica e Sistemistica, Università degli Studi di Pavia, Via Ferrata 1, Pavia, Italy. paolo.magni@unipv.it
Paolo
P
Magni
Fulvia
F
Ferrazzi
Lucia
L
Sacchi
Riccardo
R
Bellazzi
D000465:Algorithms; D001185:Artificial Intelligence; D016000:Cluster Analysis; D020869:Gene Expression Profiling / Q000379:methods*; D005810:Multigene Family / Q000502:physiology*; D020411:Oligonucleotide Array Sequence Analysis / Q000379:methods*; D010363:Pattern Recognition, Automated / Q000379:methods*; D012984:Software; D013997:Time Factors