PHOSIDA (phosphorylation site database): management, structural and evolutionary investigation, and prediction of phosphosites.
PHOSIDA http://www.phosida.com, a phosphorylation site database, integrates thousands of high-confidence in vivo phosphosites identified by mass spectrometry-based proteomics in various species. For each phosphosite, PHOSIDA lists matching kinase motifs, predicted secondary structures, conservation patterns, and its dynamic regulation upon stimulus. Using support vector machines, PHOSIDA also predicts phosphosites.
Department for Proteomics and Signal Transduction, Max-Planck Institute for Biochemistry, Am Klopferspitz, D-82152 Martinsried, Germany. gnad@biochem.mpg.de
Florian
F
Gnad
Shubin
S
Ren
Juergen
J
Cox
Jesper V
JV
Olsen
Boris
B
Macek
Mario
M
Oroshi
Matthias
M
Mann
D005075:Biological Evolution; D030562:Databases, Protein; D010750:Phosphoproteins / Q000378:metabolism*; D010766:Phosphorylation; D020543:Proteome; D012984:Software
D010750:Phosphoproteins; D020543:Proteome