Modeling metal cation-phosphate interactions in nucleic acids in the gas phase via alkali metal cation-triethyl phosphate complexes.
Threshold collision-induced dissociation techniques are employed to determine the bond dissociation energies (BDEs) of complexes of alkali metal cations, Na+, K+, Rb+, and Cs+, to triethyl phosphate (TEP). The primary and lowest energy dissociation pathway in all cases is the endothermic loss of the neutral TEP ligand. Theoretical electronic structure calculations at the B3LYP/6-311+G(2d,2p)//B3LYP/6-31G* level of theory are used to determine the structures, molecular parameters, and theoretical estimates for the BDEs of these complexes. For the complexes to Rb+ and Cs+, theoretical calculations were performed using hybrid basis sets in which the effective core potentials and valence basis sets of Hay and Wadt were used to describe the alkali metal cation, while the standard basis sets were used for all other atoms. The agreement between theory and experiment is excellent for the complexes to Na+ and K+ and is somewhat less satisfactory for the complexes to the heavier alkali metal cations, Rb+ and Cs+, where effective core potentials were used to describe the cation. The trends in the binding energies are examined. The binding of alkali metal cations to triethyl phosphate is compared with that to trimethylphosphate.
Department of Chemistry, Wayne State University, Detroit, Michigan 48202, USA.
Chunhai
C
Ruan
Hai
H
Huang
M T
MT
Rodgers
D002412:Cations / Q000737:chemistry*; D003198:Computer Simulation; D008024:Ligands; D008672:Metals, Alkali / Q000737:chemistry*; D008956:Models, Chemical; D008958:Models, Molecular; D009696:Nucleic Acids / Q000737:chemistry*; D010755:Organophosphates / Q000737:chemistry*; D010710:Phosphates / Q000737:chemistry*; D013816:Thermodynamics
D002412:Cations; D008024:Ligands; D008672:Metals, Alkali; D009696:Nucleic Acids; D010755:Organophosphates; D010710:Phosphates; C009549:triethyl phosphate