PHOSIDA (phosphorylation site database): management, structural and evolutionary investigation, and prediction of phosphosites.
PHOSIDA http://www.phosida.com, a phosphorylation site database, integrates thousands of high-confidence in vivo phosphosites identified by mass spectrometry-based proteomics in various species. For each phosphosite, PHOSIDA lists matching kinase motifs, predicted secondary structures, conservation patterns, and its dynamic regulation upon stimulus. Using support vector machines, PHOSIDA also predicts phosphosites.
Gnad
Florian
F
Department for Proteomics and Signal Transduction, Max-Planck Institute for Biochemistry, Am Klopferspitz, D-82152 Martinsried, Germany. gnad@biochem.mpg.de
Ren
Shubin
S
Cox
Juergen
J
Olsen
Jesper V
JV
Macek
Boris
B
Oroshi
Mario
M
Mann
Matthias
M
D005075:Biological Evolution; D030562:Databases, Protein; D010750:Phosphoproteins / Q000378:metabolism*; D010766:Phosphorylation; D020543:Proteome; D012984:Software
D010750:Phosphoproteins; D020543:Proteome