Bistable behavior in a model of the lac operon in Escherichia coli with variable growth rate.
This work is a continuation from another study previously published in this journal. Both the former and the present works are dedicated to investigating the bistable behavior of the lac operon in Escherichia coli from a mathematical modeling point of view. In the previous article, we developed a detailed mathematical model that accounts for all of the known regulatory mechanisms in this system, and studied the effect of inducing the operon with lactose instead of an artificial inducer. In this article, the model is improved to account, in a more detailed way, for the interaction of the repressor molecules with the three lac operators. A recently discovered cooperative interaction between the CAP molecule (an activator of the lactose operon) and Operator 3 (which influences DNA folding) is also included in this new version of the model. The growth rate dependence on the rate of energy entering the bacteria (in the form of transported glucose molecules and of metabolized lactose molecules) is also considered. A large number of numerical experiments is carried out with this improved model. The results are discussed in regard to the bistable behavior of the lactose operon. Special attention is paid to the effect that a variable growth rate has on the system dynamics.
Santillán
M
M
Unidad Monterrey, Centro de Investigación y Estudios Avanzados del IPN, Monterrey, México. moises.santillan@mac.com
D018407:Bacterial Physiological Phenomena; D001703:Biophysics / Q000379:methods; D003198:Computer Simulation; D002373:Cyclic AMP Receptor Protein; D004247:DNA / Q000737:chemistry; D004926:Escherichia coli / Q000378:metabolism*; D015964:Gene Expression Regulation, Bacterial; D007763:Lac Operon; D007785:Lactose / Q000737:chemistry; D008954:Models, Biological; D008957:Models, Genetic; D008962:Models, Theoretical; D009690:Nucleic Acid Conformation; D010455:Peptides / Q000737:chemistry
D002373:Cyclic AMP Receptor Protein; D010455:Peptides; D004247:DNA; D007785:Lactose