title: Orthologs of the small RPB8 subunit of the eukaryotic RNA polymerases are conserved in hyperthermophilic Crenarchaeota and "Korarchaeota".
abstract: Although most of the key components of the transcription apparatus, and in particular, RNA polymerase (RNAP) subunits, are conserved between archaea and eukaryotes, no archaeal homologs of the small RPB8 subunit of eukaryotic RNAP have been detected. We report that orthologs of RPB8 are encoded in all sequenced genomes of hyperthermophilic Crenarchaeota and a recently sequenced "korarchaeal" genome, but not in Euryarchaeota or the mesophilic crenarchaeon Cenarchaeum symbiosum. These findings suggest that all 12 core subunits of eukaryotic RNAPs were already present in the last common ancestor of the extant archaea.
authors: National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA. koonin@ncbi.nlm.nih.gov
authors: Eugene V
authors: EV
authors: Koonin
authors: Kira S
authors: KS
authors: Makarova
authors: James G
authors: JG
authors: Elkins
mesh_terms: D000595:Amino Acid Sequence; D019843:Archaeal Proteins / Q000235:genetics; D019615:Crenarchaeota / Q000235:genetics*; D012321:DNA-Directed RNA Polymerases / Q000235:genetics*; D005057:Eukaryotic Cells; D019143:Evolution, Molecular; D020745:Genome, Archaeal; D008969:Molecular Sequence Data; D010802:Phylogeny; D017433:Protein Structure, Secondary; D019642:RNA, Archaeal / Q000235:genetics; D017386:Sequence Homology, Amino Acid
chemical_list: D019843:Archaeal Proteins; D019642:RNA, Archaeal; D012321:DNA-Directed RNA Polymerases