title: Fungal endophytes from Dioscorea zingiberensis rhizomes and their antibacterial activity.
abstract: OBJECTIVE
  The aim of the study was to isolate and characterize the endophytic fungi from the rhizomes of the Chinese traditional medicinal plant Dioscorea zingiberensis and to detect their antibacterial activities.
  
  
  RESULTS
  After strict sterile sample preparation, nine fungal endophytes were isolated from rhizomes of the Chinese traditional medicinal plant D. zingiberensis. The endophytes were classified by morphological traits and internal transcribed spacer (ITS) rRNA gene sequence analysis. Their ITS rDNA sequences were 99-100% identical to Nectria, Fusarium, Rhizopycnis, Acremonium and Penicillium spp. respectively. Of these, the most frequent genera were Fusarium and Nectria. One isolate, Dzf7, was unclassified on the basis of its low sequence similarity. The next closest species was Alternaria longissima (c. 92.4% sequence similarity). Endophyte isolate Dzf5 showed the closest sequence similarity (c. 99.5%) to an uncultured soil fungus (DQ420800) obtained from Cedar Creek, USA. Bioassays using a modified broth dilution test were used to detect the antibacterial activity of n-butanol extracts of both mycelia and culture filtrates of D. zingiberensis showed biological activity against Bacillus subtilis, Staphylococcus haemolyticus, Escherichia coli and Xanthomonas vesicatoria. Minimal inhibitory concentration (MIC) values of the extracts were between 31 x 25 microg ml(-1) and 125 microg ml(-1).
  
  
  CONCLUSIONS
  Endophytic fungus Dzf2 (c. 99 x 8% sequence similarity to Fusarium redolens) isolated from D. zingiberensis rhizome showed the most potent antibacterial activities.
  
  
  CONCLUSIONS
  Endophytic fungi isolated from D. zingiberensis may be used as potential producers of antibacterial natural products.
authors: Department of Plant Pathology, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China.
authors: L
authors: L
authors: Xu
authors: L
authors: L
authors: Zhou
authors: J
authors: J
authors: Zhao
authors: J
authors: J
authors: Li
authors: X
authors: X
authors: Li
authors: J
authors: J
authors: Wang
mesh_terms: D000898:Antibiosis; D001419:Bacteria / Q000254:growth & development; D002681:China; D004271:DNA, Fungal / Q000235:genetics; D004275:DNA, Ribosomal / Q000235:genetics; D027742:Dioscorea / Q000382:microbiology*; D005658:Fungi / Q000737:chemistry* / Q000235:genetics / Q000302:isolation & purification* / Q000502:physiology; D008826:Microbial Sensitivity Tests; D025282:Mycelium / Q000737:chemistry; D010946:Plants, Medicinal / Q000382:microbiology; D027343:Rhizome / Q000382:microbiology*; D017422:Sequence Analysis, DNA
chemical_list: D004271:DNA, Fungal; D004275:DNA, Ribosomal