title: Effect of soil and water environment on typeability of PowerPlex Y (Promega) in selected tissue samples.
abstract: In cases of decomposed bodies Y chromosomal STR markers may be useful in identification of a male relative. The authors assessed typeability PowerPlex Y (Promega) loci in tissue material stored in water and soil environment. Tissue material was collected during autopsies of five persons aged 20-30 years with time of death determined within the limit of 14 hours. Heart muscle, liver and lung specimens were stored in pond water, sea water, sand and peat soil. DNA was extracted by organic method from tissue samples collected in 7-day intervals. Liver specimens were typeable in all PowerPlex Y loci within 100 days of storage in pond water with gradual decline at DYS392 in sea water. Heart muscle specimens stored in pond water exhibited allelic loss at DYS19, DYS385, DYS389II and DYS392, while all loci were typeable in sea water stored samples. For lung specimens allelic loss was noted throughout the profile. Storage of liver specimens in peat soil for more than 14 days resulted in allelic drop-out, and after 21 days no profiles were typeable. Heart muscle specimens were typeable in all PowerPlex Y systems after 35-day storage in sand, while allelic drop-out and subsequent lack of profiles were noted after 14 and 35 days respectively. Lung specimens stored in garden soil exhibited allelic drop-out and subsequent lack of profiles after 7 and 21 days, respectively. All PowerPlex Y loci were typeable in the latter material in sand up to day 35 with gradual decline of longer amplicons (DYS19, DYS385, DYS389II and DYS392).
authors.affiliation: Department of Forensic Medicine, Medical University of Bialystok, Poland. annaniem@poczta.onet.pl
authors.forename: Anna
authors.initials: A
authors.lastname: Niemcunowicz-Janica
authors.forename: Witold
authors.initials: W
authors.lastname: Pepinski
authors.forename: Jacek Robert
authors.initials: JR
authors.lastname: Janica
authors.forename: Malgorzata
authors.initials: M
authors.lastname: Skawronska
authors.forename: Jerzy
authors.initials: J
authors.lastname: Janica
authors.forename: Ewa
authors.initials: E
authors.lastname: Koc-Zorawska
authors.forename: Ireneusz
authors.initials: I
authors.lastname: Stolyszewski
mesh_terms: D000328:Adult; D004777:Environment; D053803:Forensic Genetics / Q000379:methods*; D006801:Humans; D012987:Soil; D013048:Specimen Handling; D014867:Water
chemical_list: D012987:Soil; D014867:Water