title: Single particle image reconstruction of the human recombinant Kv2.1 channel.
abstract: Kv2.1 channels are widely expressed in neuronal and endocrine cells and generate slowly activating K+ currents, which contribute to repolarization in these cells. Kv2.1 is expressed at high levels in the mammalian brain and is a major component of the delayed rectifier current in the hippocampus. In addition, Kv2.1 channels have been implicated in the regulation of membrane repolarization, cytoplasmic calcium levels, and insulin secretion in pancreatic beta-cells. They are therefore an important drug target for the treatment of Type II diabetes mellitus. We used electron microscopy and single particle image analysis to derive a three-dimensional density map of recombinant human Kv2.1. The tetrameric channel is egg-shaped with a diameter of approximately 80 A and a long axis of approximately 120 A. Comparison to known crystal structures of homologous domains allowed us to infer the location of the cytoplasmic and transmembrane assemblies. There is a very good fit of the Kv1.2 crystal structure to the assigned transmembrane assembly of Kv2.1. In other low-resolution maps of K+ channels, the cytoplasmic N-terminal and transmembrane domains form separate rings of density. In contrast, Kv2.1 displays contiguous density that connects the rings, such that there are no large windows between the channel interior and the cytoplasmic space. The crystal structure of KcsA is thought to be in a closed conformation, and the good fit of the KcsA crystal structure to the Kv2.1 map suggests that our preparations of Kv2.1 may also represent a closed conformation. Substantial cytoplasmic density is closely associated with the T1 tetramerization domain and is ascribed to the approximately 184 kDa C-terminal regulatory domains within each tetramer.
authors.affiliation: The Scripps Research Institute, Department of Cell Biology, La Jolla, California 92037, USA.
authors.forename: Brian
authors.initials: B
authors.lastname: Adair
authors.forename: Rashmi
authors.initials: R
authors.lastname: Nunn
authors.forename: Shannon
authors.initials: S
authors.lastname: Lewis
authors.forename: Iain
authors.initials: I
authors.lastname: Dukes
authors.forename: Louis
authors.initials: L
authors.lastname: Philipson
authors.forename: Mark
authors.initials: M
authors.lastname: Yeager
mesh_terms: D000818:Animals; D001703:Biophysics / Q000379:methods*; D016466:CHO Cells; D002462:Cell Membrane / Q000378:metabolism; D006224:Cricetinae; D003412:Cricetulus; D018360:Crystallography, X-Ray / Q000379:methods; D003593:Cytoplasm / Q000378:metabolism; D006801:Humans; D007091:Image Processing, Computer-Assisted / Q000379:methods*; D008854:Microscopy, Electron / Q000379:methods; D008968:Molecular Conformation; D017434:Protein Structure, Tertiary; D011994:Recombinant Proteins / Q000737:chemistry*; D051669:Shab Potassium Channels / Q000737:chemistry*
chemical_list: C496988:KCNB1 protein, human; D011994:Recombinant Proteins; D051669:Shab Potassium Channels