title: Conformational stability of PrP amyloid fibrils controls their smallest possible fragment size.
abstract: Fibril fragmentation is considered to be an essential step in prion replication. Recent studies have revealed a strong correlation between the incubation period to prion disease and conformational stability of synthetic prions. To gain insight into the molecular mechanism that accounts for this correlation, we proposed that the conformational stability of prion fibrils controls their intrinsic fragility or the size of the smallest possible fibrillar fragments. Using amyloid fibrils produced from full-length mammalian prion protein under three growth conditions, we found a correlation between conformational stability and the smallest possible fragment sizes. Specifically, the fibrils that were conformationally less stable were found to produce shorter pieces upon fragmentation. Site-specific denaturation experiments revealed that the fibril conformational stability was controlled by the region that acquires a cross-beta-sheet structure. Using atomic force microscopy imaging, we found that fibril fragmentation occurred in both directions--perpendicular to and along the fibrillar axis. Two mechanisms of fibril fragmentation were identified: (i) fragmentation caused by small heat shock proteins, including alpha B-crystallin, and (ii) fragmentation due to mechanical stress arising from adhesion of the fibril to a surface. This study provides new mechanistic insight into the prion replication mechanism and offers a plausible explanation for the correlation between conformational stability of synthetic prions and incubation time to prion disease.
authors.affiliation: Medical Biotechnology Center, University of Maryland Biotechnology Institute, 725 West Lombard Street, Baltimore, MD 21201, USA.
authors.forename: Ying
authors.initials: Y
authors.lastname: Sun
authors.forename: Natallia
authors.initials: N
authors.lastname: Makarava
authors.forename: Cheng-I
authors.initials: CI
authors.lastname: Lee
authors.forename: Pongpan
authors.initials: P
authors.lastname: Laksanalamai
authors.forename: Frank T
authors.initials: FT
authors.lastname: Robb
authors.forename: Ilia V
authors.initials: IV
authors.lastname: Baskakov
mesh_terms: D000682:Amyloid / Q000737:chemistry* / Q000648:ultrastructure; D000818:Animals; D002417:Cattle; D019791:Guanidine / Q000494:pharmacology; D050888:Heat-Shock Proteins, Small / Q000737:chemistry; D051379:Mice; D018625:Microscopy, Atomic Force; D010446:Peptide Fragments / Q000737:chemistry*; D011328:Prions / Q000737:chemistry*; D011487:Protein Conformation / Q000187:drug effects; D011489:Protein Denaturation / Q000187:drug effects; D020027:Pyrococcus furiosus; D017386:Sequence Homology, Amino Acid; D012997:Solvents; D013010:Sonication; D013314:Stress, Mechanical; D013816:Thermodynamics; D038203:alpha-Crystallin B Chain / Q000737:chemistry
chemical_list: D000682:Amyloid; D050888:Heat-Shock Proteins, Small; D010446:Peptide Fragments; D011328:Prions; D012997:Solvents; D038203:alpha-Crystallin B Chain; D019791:Guanidine