Phyutility: a phyloinformatics tool for trees, alignments and molecular data.
CONCLUSIONS
Phyutility provides a set of phyloinformatics tools for summarizing and manipulating phylogenetic trees, manipulating molecular data and retrieving data from NCBI. Its simple command-line interface allows for easy integration into scripted analyses, and is able to handle large datasets with an integrated database.


BACKGROUND
Phyutility, including source code, documentation, examples, and executables, is available at http://code.google.com/p/phyutility.
Smith
Stephen A
SA
Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT 06520, USA. stephen.smith@yale.edu
Dunn
Casey W
CW
D019295:Computational Biology; D010802:Phylogeny; D016415:Sequence Alignment; D014584:User-Computer Interface