title: Basic protein sequence analysis.
abstract: Prediction of molecular function of proteins has become an important task in the genomics era. A wide variety of sequence analysis tools are available to biologists for this task. We have selected one or two primary protocols for tasks such as domain detection, subcellular localization, and motif detection. We also present a strategy for integration of results from different protocols. All the resources needed for these protocols are accessible via publicly available Web servers and databases and require little or no computational expertise.
authors.affiliation: University of California, Berkeley, California, USA.
authors.forename: Nandini
authors.initials: N
authors.lastname: Krishnamurthy
authors.forename: Kimmen V
authors.initials: KV
authors.lastname: Sjölander
mesh_terms: D020816:Amino Acid Motifs; D003628:Database Management Systems; D016247:Information Storage and Retrieval; D020407:Internet; D017434:Protein Structure, Tertiary; D020539:Sequence Analysis, Protein / Q000379:methods*; D012984:Software; D014584:User-Computer Interface