title: On the signaling mechanism and the absence of photoreversibility in the AppA BLUF domain.
abstract: The flavoprotein AppA from Rhodobacter sphaeroides contains an N-terminal, FAD-binding BLUF photoreceptor domain. Upon illumination, the AppA BLUF domain forms a signaling state that is characterized by red-shifted absorbance by 10 nm, a state known as AppA(RED). We have applied ultrafast spectroscopy on the photoaccumulated AppA(RED) state to investigate the photoreversible properties of the AppA BLUF domain. On light absorption by AppA(RED), the FAD singlet excited state FAD(RED)* decays monoexponentially in 7 ps to form the neutral semiquinone radical FADH(*), which subsequently decays to the original AppA(RED) molecular ground state in 60 ps. Thus, FAD(RED)* is deactivated rapidly via electron and proton transfer, probably from the conserved tyrosine Tyr-21 to FAD, followed by radical-pair recombination. We conclude that, in contrast to many other photoreceptors, the AppA BLUF domain is not photoreversible and does not enter alternative reaction pathways upon absorption of a second photon. To explain these properties, we propose that a molecular configuration is formed upon excitation of AppA(RED) that corresponds to a forward reaction intermediate previously identified for the dark-state BLUF photoreaction. Upon excitation of AppA(RED), the BLUF domain therefore enters its forward reaction coordinate, readily re-forming the AppA(RED) ground state and suppressing reverse or side reactions. The monoexponential decay of FAD* indicates that the FAD-binding pocket in AppA(RED) is significantly more rigid than in dark-state AppA. Steady-state fluorescence experiments on wild-type, W104F, and W64F mutant BLUF domains show tryptophan fluorescence maxima that correspond with a buried conformation of Trp-104 in dark and light states. We conclude that Trp-104 does not become exposed to solvent during the BLUF photocycle.
authors.affiliation: Biophysics Group, Department of Physics and Astronomy, Faculty of Sciences, Vrije Universiteit, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands.
authors.forename: K C
authors.initials: KC
authors.lastname: Toh
authors.forename: Ivo H M
authors.initials: IH
authors.lastname: van Stokkum
authors.forename: Johnny
authors.initials: J
authors.lastname: Hendriks
authors.forename: Maxime T A
authors.initials: MT
authors.lastname: Alexandre
authors.forename: J C
authors.initials: JC
authors.lastname: Arents
authors.forename: Marcela Avila
authors.initials: MA
authors.lastname: Perez
authors.forename: Rienk
authors.initials: R
authors.lastname: van Grondelle
authors.forename: Klaas J
authors.initials: KJ
authors.lastname: Hellingwerf
authors.forename: John T M
authors.initials: JT
authors.lastname: Kennis
mesh_terms: D001426:Bacterial Proteins / Q000737:chemistry* / Q000528:radiation effects / Q000648:ultrastructure*; D003198:Computer Simulation; D005420:Flavoproteins / Q000737:chemistry* / Q000528:radiation effects / Q000648:ultrastructure*; D008027:Light; D008956:Models, Chemical; D008958:Models, Molecular; D010777:Photochemistry / Q000379:methods*; D011487:Protein Conformation / Q000528:radiation effects; D017434:Protein Structure, Tertiary / Q000528:radiation effects; D011829:Radiation Dosage
chemical_list: C116785:AppA protein, Rhodobacter sphaeroides; D001426:Bacterial Proteins; D005420:Flavoproteins