[Non-standard genetic codes and translation termination].
Genetic code is not universal. Various non-standard versions of the code were found in mitochondrial, prokaryotic and eukaryotic genomes. Stop codons are used to signal the ribosome stop translation of the coding sequence and prone to reassignment to sense codons. Class-1 termination factors recognize stop codons and promote hydrolysis of the peptidyl-tRNA in ribosome (RF1, RF2 in prokaryotes and eRF1 in eukaryotes). The class-1 factor termination specificity is changed in non-standart codes organisms. Pyrrolysine and selenocysteine use dissimilar decoding strategies. The various non-standart code origin hypotheses are described. It was proposed that specificity alteration of the class-1 release factor was a starting point for stop codon reassignment.
Lekomtsev
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D000818:Animals; D018388:Codon, Terminator; D005815:Genetic Code; D006801:Humans; D008239:Lysine / Q000031:analogs & derivatives / Q000235:genetics; D008928:Mitochondria / Q000235:genetics / Q000378:metabolism; D010454:Peptide Termination Factors / Q000502:physiology; D014176:Protein Biosynthesis; D012343:RNA, Transfer / Q000235:genetics; D017279:Selenocysteine / Q000235:genetics
D018388:Codon, Terminator; D010454:Peptide Termination Factors; D017279:Selenocysteine; D012343:RNA, Transfer; C456839:pyrrolysine; D008239:Lysine