Prologue: mind over molecule: activating biological demons.
The new vogue for systems biology is an important development. It is time to complement reductionist molecular biology by integrative approaches. But this welcome development is in danger of losing its way. Many of the early implementations of the approach are very low level, in some cases hardly more than an extension of genomics and bioinformatics. In this paper, I outline some general principles that could form the basis of systems biology as a truly multilevel approach. We need the insights obtained from a higher level analysis in order to succeed at the lower levels. Higher levels in biological systems impose boundary conditions on the lower levels. Without understanding those conditions and their effects, we will be seriously restricted in understanding the logic of living systems. Sydney Brenner has insisted that "the cell is the correct level of abstraction." I would go further and insist on the value of abstraction at even higher levels than the cell, while recognizing the cell as a landmark level of biological organization. The principles outlined are illustrated with examples from cardiac and other aspects of physiology and biochemistry.
Noble
Denis
D
Department of Physiology, Anatomy and Genetics, Oxford University, Parks Road, Oxford OX1 3PT UK. denis.noble@physiol.ox.ac.uk
D001921:Brain / Q000502:physiology; D004247:DNA / Q000235:genetics; D005826:Genetics, Medical; D006801:Humans; D008957:Models, Genetic; D011506:Proteins / Q000235:genetics; D012313:RNA / Q000235:genetics; D049490:Systems Biology / Q000379:methods* / Q000639:trends
D011506:Proteins; D012313:RNA; D004247:DNA