title: A CD4 homologue in sea bass (Dicentrarchus labrax): molecular characterization and structural analysis.
abstract: CD4 is a transmembrane glycoprotein fundamental for cell-mediated immunity. Its action as a T cell co-receptor increases the avidity of association between a T cell and an antigen-presenting cell by interacting with portions of the complex between MHC class II and TR molecules. In this paper we report the cDNA cloning, expression and structural analysis of a CD4 homologue from sea bass (Dicentrarchus labrax). The sea bass CD4 cDNA consists of 2071 bp that translates in one reading frame to give the entire molecule containing 480 amino acids. The analysis of the sequence shows the presence of four putative Ig-like domains and that some fundamental structural features, like a disulphide bond in domain D2 and the CXC signalling motif in the cytoplasmic tail, are conserved from sea bass to mammals. Real-time PCR analysis showed that very high levels of CD4 mRNA transcripts are present in thymus, followed by gut and gills. In vitro stimulation of head kidney leukocytes with LPS and PHA-L gave an increase of CD4 mRNA levels after 4h and a decrease after 24h. Homology modelling has been applied to create a 3D model of sea bass CD4 and to investigate its interaction with sea bass MHC-II. The analysis of the 3D complex between sea bass CD4 and sea bass MHC-II suggests that the absence of a disulfide bond in the CD4 D1 domain could make this molecule more flexible, inducing a different conformation and affecting the binding and the way of interaction between CD4 and MHC-II. Our results will add new insights into the sea bass T cell immune responses and will help in the identification of T cell subsets in teleost fishes to better understand the evolution of cell-mediated immunity from fish to mammals.
authors.affiliation: Dipartimento di Scienze Ambientali, University of Tuscia, Largo dell'Università s.n.c., 01100 Viterbo, Italy. fbuono@unitus.it
authors.forename: Francesco
authors.initials: F
authors.lastname: Buonocore
authors.forename: Elisa
authors.initials: E
authors.lastname: Randelli
authors.forename: Daniela
authors.initials: D
authors.lastname: Casani
authors.forename: Laura
authors.initials: L
authors.lastname: Guerra
authors.forename: Simona
authors.initials: S
authors.lastname: Picchietti
authors.forename: Susan
authors.initials: S
authors.lastname: Costantini
authors.forename: Angelo M
authors.initials: AM
authors.lastname: Facchiano
authors.forename: Jun
authors.initials: J
authors.lastname: Zou
authors.forename: Chris J
authors.initials: CJ
authors.lastname: Secombes
authors.forename: Giuseppe
authors.initials: G
authors.lastname: Scapigliati
mesh_terms: D000818:Animals; D001483:Base Sequence; D001492:Bass / Q000276:immunology*; D015704:CD4 Antigens / Q000737:chemistry* / Q000235:genetics* / Q000378:metabolism; D003198:Computer Simulation; D018076:DNA, Complementary / Q000235:genetics; D000949:Histocompatibility Antigens Class II / Q000737:chemistry; D006801:Humans; D008958:Models, Molecular; D008969:Molecular Sequence Data; D010802:Phylogeny; D017433:Protein Structure, Secondary; D016415:Sequence Alignment; D017422:Sequence Analysis, DNA; D017386:Sequence Homology, Amino Acid; D040681:Structural Homology, Protein
chemical_list: D015704:CD4 Antigens; D018076:DNA, Complementary; D000949:Histocompatibility Antigens Class II