Using the Gibbs motif sampler to find conserved domains in DNA and protein sequences.
The Gibbs Motif Sampler (Gibbs) is a software package for discovering conserved elements in biopolymer sequences. This unit describes the basic operation of the Web-based interface to Gibbs, along with advanced examples of its use, and the Web interface to dscan, a sequence database search program.
Thompson
William
W
Brown University, Providence, Rhode Island, USA.
McCue
Lee Ann
LA
Lawrence
Charles E
CE
D017124:Conserved Sequence; D004247:DNA / Q000235:genetics*; D017434:Protein Structure, Tertiary; D011506:Proteins / Q000737:chemistry*; D018401:Sample Size; D016415:Sequence Alignment / Q000379:methods*; D017422:Sequence Analysis, DNA / Q000379:methods*; D020539:Sequence Analysis, Protein / Q000379:methods*; D012815:Signal Processing, Computer-Assisted
D011506:Proteins; D004247:DNA