title: Software.ncrna.org: web servers for analyses of RNA sequences.
abstract: We present web servers for analysis of non-coding RNA sequences on the basis of their secondary structures. Software tools for structural multiple sequence alignments, structural pairwise sequence alignments and structural motif findings are available from the integrated web server and the individual stand-alone web servers. The servers are located at http://software.ncrna.org, along with the information for the evaluation and downloading. This website is freely available to all users and there is no login requirement.
authors.affiliation: Department of Computational Biology, Graduate School of Frontier Sciences, University of Tokyo, 5-1-5 Kashiwa-no-ha, Chiba 277-8561, Japan.
authors.forename: Kiyoshi
authors.initials: K
authors.lastname: Asai
authors.forename: Hisanori
authors.initials: H
authors.lastname: Kiryu
authors.forename: Michiaki
authors.initials: M
authors.lastname: Hamada
authors.forename: Yasuo
authors.initials: Y
authors.lastname: Tabei
authors.forename: Kengo
authors.initials: K
authors.lastname: Sato
authors.forename: Hiroshi
authors.initials: H
authors.lastname: Matsui
authors.forename: Yasubumi
authors.initials: Y
authors.lastname: Sakakibara
authors.forename: Goro
authors.initials: G
authors.lastname: Terai
authors.forename: Toutai
authors.initials: T
authors.lastname: Mituyama
mesh_terms: D020407:Internet; D009690:Nucleic Acid Conformation; D022661:RNA, Untranslated / Q000737:chemistry*; D016415:Sequence Alignment; D017423:Sequence Analysis, RNA; D012984:Software
chemical_list: D022661:RNA, Untranslated