title: The Vienna RNA websuite.
abstract: The Vienna RNA Websuite is a comprehensive collection of tools for folding, design and analysis of RNA sequences. It provides a web interface to the most commonly used programs of the Vienna RNA package. Among them, we find folding of single and aligned sequences, prediction of RNA-RNA interactions, and design of sequences with a given structure. Additionally, we provide analysis of folding landscapes using the barriers program and structural RNA alignments using LocARNA. The web server together with software packages for download is freely accessible at http://rna.tbi.univie.ac.at/.
authors.affiliation: Institute for Theoretical Chemistry, University of Vienna, Währingerstrasse 17, 1090 Wien, Austria.
authors.forename: Andreas R
authors.initials: AR
authors.lastname: Gruber
authors.forename: Ronny
authors.initials: R
authors.lastname: Lorenz
authors.forename: Stephan H
authors.initials: SH
authors.lastname: Bernhart
authors.forename: Richard
authors.initials: R
authors.lastname: Neuböck
authors.forename: Ivo L
authors.initials: IL
authors.lastname: Hofacker
mesh_terms: D020407:Internet; D009690:Nucleic Acid Conformation; D012313:RNA / Q000737:chemistry*; D016415:Sequence Alignment; D017423:Sequence Analysis, RNA; D012984:Software
chemical_list: D012313:RNA