title: Comparison of the adsorbed conformation of barley lipid transfer protein at the decane-water and vacuum-water interface: a molecular dynamics simulation.
abstract: Molecular dynamics simulation is used to model the adsorption of the barley lipid transfer protein (LTP) at the decane-water and vacuum-water interfaces. Adsorption at both surfaces is driven by displacement of water molecules from the interfacial region. LTP adsorbed at the decane surface exhibits significant changes in its tertiary structure, and penetrates a considerable distance into the decane phase. At the vacuum-water interface LTP shows small conformational changes away from its native structure and does not penetrate into the vacuum space. Modification of the conformational stability of LTP by reduction of its four disulphide bonds leads to an increase in conformational entropy of the molecules, which reduces the driving force for adsorption. Evidence for changes in the secondary structure are also observed for native LTP at the decane-water interface and reduced LTP at the vacuum-water interface. In particular, intermittent formation of short (six-residue) regions of beta-sheet is found in these two systems. Formation of interfacial beta-sheet in adsorbed proteins has been observed experimentally, notably in the globular milk protein beta-lactoglobulin and lysozyme.
authors.affiliation: School of Life Sciences, International Centre for Brewing and Distilling, Heriot-Watt University, Edinburgh, EH14 4AS, United Kingdom. s.r.euston@hw.ac.uk
authors.forename: S R
authors.initials: SR
authors.lastname: Euston
authors.forename: P
authors.initials: P
authors.lastname: Hughes
authors.forename: Md A
authors.initials: MA
authors.lastname: Naser
authors.forename: R E
authors.initials: RE
authors.lastname: Westacott
mesh_terms: D000327:Adsorption; D000473:Alkanes; D002352:Carrier Proteins / Q000737:chemistry*; D003198:Computer Simulation; D001467:Hordeum / Q000737:chemistry*; D010084:Oxidation-Reduction; D010940:Plant Proteins / Q000737:chemistry; D011487:Protein Conformation; D017433:Protein Structure, Secondary; D014618:Vacuum; D014867:Water
chemical_list: D000473:Alkanes; D002352:Carrier Proteins; D010940:Plant Proteins; C030363:lipid transfer protein; D014867:Water; C012867:decane