title: TNF-alpha stimulation inhibits siRNA-mediated RNA interference through a mechanism involving poly-(A) tail stabilization.
abstract: The control of mRNA stability is a complex biological process that involves numerous factors, including microRNA (miRNA) and short interfering RNA (siRNA). Here, we show that short interfering RNA (siRNA) and microRNA share some similarities in their response to cellular stress. miR16 expedites the degradation of mRNAs containing AU-rich elements (ARE) in their 3' untranslated region (UTR). si20 is an siRNA designed to target a non-ARE sequence in the TNF 3'UTR. We found that both si20 and miR16/ARE-mediated degradation of mRNAs can be inhibited by stimulating cells with different stresses. By analyzing TNF-alpha stimulation-mediated stabilization of si20- and miR16-targeted mRNA, we show that this stabilization is not caused by modifying si20 and miR16 loading into Ago2 complexes, or mRNA targeting to Ago2, but by inhibiting mRNA deadenylation. This is the first report showing that a specific siRNA-mediated mRNA degradation can be regulated by inflammatory stimuli, and that deadenylation is involved in this siRNA-mediated mRNA decay.
authors.affiliation: Department of Immunology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.
authors.forename: Johann
authors.initials: J
authors.lastname: Mols
authors.forename: Arjen
authors.initials: A
authors.lastname: van den Berg
authors.forename: Motoyuki
authors.initials: M
authors.lastname: Otsuka
authors.forename: Min
authors.initials: M
authors.lastname: Zheng
authors.forename: Jianming
authors.initials: J
authors.lastname: Chen
authors.forename: Jiahuai
authors.initials: J
authors.lastname: Han
mesh_terms: D000225:Adenine / Q000378:metabolism; D000818:Animals; D060565:Argonaute Proteins; D001483:Base Sequence; D022083:Cytoplasmic Structures / Q000187:drug effects / Q000378:metabolism; D015852:Eukaryotic Initiation Factor-2 / Q000378:metabolism; D005110:Extracellular Space / Q000187:drug effects / Q000378:metabolism; D017930:Genes, Reporter; D006367:HeLa Cells; D006801:Humans; D007249:Inflammation; D051379:Mice; D011061:Poly A / Q000378:metabolism*; D021381:Protein Transport / Q000187:drug effects; D012315:RNA Caps / Q000378:metabolism; D034622:RNA Interference / Q000187:drug effects*; D020871:RNA Stability / Q000187:drug effects*; D012333:RNA, Messenger / Q000235:genetics / Q000378:metabolism; D034741:RNA, Small Interfering / Q000378:metabolism*; D014409:Tumor Necrosis Factor-alpha / Q000378:metabolism / Q000494:pharmacology*
chemical_list: C466422:AGO2 protein, human; D060565:Argonaute Proteins; D015852:Eukaryotic Initiation Factor-2; D012315:RNA Caps; D012333:RNA, Messenger; D034741:RNA, Small Interfering; D014409:Tumor Necrosis Factor-alpha; D011061:Poly A; D000225:Adenine