title: RNA secondary structure analysis using RNAstructure.
abstract: RNAstructure is a user-friendly program for the prediction and analysis of RNA secondary structure under Microsoft Windows. This unit provides protocols for RNA secondary structure prediction and prediction of high-affinity oligonucleotide binding sites to a structured RNA target.
authors.affiliation: University of Rochester Medical Center, Rochester, New York, USA.
authors.forename: David H
authors.initials: DH
authors.lastname: Mathews
mesh_terms: D000465:Algorithms; D001483:Base Sequence; D001665:Binding Sites; D003198:Computer Simulation; D018390:Gene Targeting / Q000379:methods*; D008956:Models, Chemical; D008958:Models, Molecular; D008969:Molecular Sequence Data; D009690:Nucleic Acid Conformation; D012313:RNA / Q000235:genetics* / Q000648:ultrastructure*; D017423:Sequence Analysis, RNA / Q000379:methods*; D012984:Software
chemical_list: D012313:RNA