title: A PCR-based tool for the cultivation-independent monitoring of Pandora neoaphidis.
abstract: Pandora neoaphidis is one of the most important fungal pathogens of aphids and has a great potential for use in biocontrol. Little is known on how this fungus persists in an area and in particular on its overwintering strategies. It is hypothesized that natural areas play an important role for survival and that soil may serve as a source of inoculum for new aphid populations in spring. To test these hypotheses, a cultivation-independent PCR-based diagnostic tool was developed, that allows the detection of P. neoaphidis in the environment. Two P. neoaphidis specific PCR primer pairs were designed, targeting sequences in the ribosomal RNA gene cluster. Specificity of both primer pairs was demonstrated with P. neoaphidis and non-target close entomophthoralean relatives. Moreover, single amplicons of expected sizes were obtained with both primer pairs from various environmental sample types, including aphid cadavers, plant material, and soil. The PCR-based diagnostic tool was applied to investigate the persistence of P. neoaphidis in soil samples obtained in 2004/2005 from a nettle field harboring infected aphids in fall 2004. P. neoaphidis was detected in every sample collected in November 2004 and March 2005, suggesting an overwintering stage of P. neoaphidis in top soil layers. The developed cultivation-independent PCR-based tool will be valuable for further investigation of the ecology of P. neoaphidis and for the development and future implementation of management strategies against aphids involving conservation biocontrol.
authors.affiliation: Molecular Ecology, Agroscope Reckenholz-Tänikon Research Station ART, Zürich, Switzerland.
authors.forename: A
authors.initials: A
authors.lastname: Fournier
authors.forename: J
authors.initials: J
authors.lastname: Enkerli
authors.forename: S
authors.initials: S
authors.lastname: Keller
authors.forename: F
authors.initials: F
authors.lastname: Widmer
mesh_terms: D000818:Animals; D001042:Aphids / Q000382:microbiology*; D001483:Base Sequence; D004271:DNA, Fungal / Q000737:chemistry / Q000235:genetics; D018744:DNA, Plant / Q000737:chemistry / Q000235:genetics; D020091:Entomophthorales / Q000235:genetics / Q000302:isolation & purification*; D004784:Environmental Monitoring / Q000379:methods; D005800:Genes, Fungal / Q000235:genetics*; D006605:Hibernation; D008969:Molecular Sequence Data; D016133:Polymerase Chain Reaction / Q000379:methods*; D012335:RNA, Ribosomal / Q000235:genetics*; D017423:Sequence Analysis, RNA; D012988:Soil Microbiology; D020096:Zygomycosis / Q000235:genetics / Q000382:microbiology / Q000662:veterinary*
chemical_list: D004271:DNA, Fungal; D018744:DNA, Plant; D012335:RNA, Ribosomal