Assignment of the ferriheme resonances of high- and low-spin forms of the symmetrical hemin-reconstituted nitrophorins 1-4 by 1H and 13C NMR spectroscopy: the dynamics of heme ruffling deformations.
The four major nitrophorins (NPs) of the adult blood-sucking insect Rhodnius prolixus have been reconstituted with the "symmetrical hemin" 2,4-dimethyldeuterohemin, and their NMR spectra have been investigated as the high-spin (S=5/2) aqua and low-spin (S=1/2) N-methylimidazole (NMeIm) and cyanide complexes. The NMeIm complexes allow assignment of the high-spin hemin resonances by saturation transfer difference spectroscopy. The cyanide complexes were investigated as paramagnetic analogues of the NO complexes. It is shown that the hemin ring is highly distorted from planarity, much more so for NP2 than for NP1 and NP4 (with ruffling being the major distortion mode), for both high- and low-spin forms. For the cyanide complexes, the conformation of the distorted ring changes on the NMR timescale to yield chemical exchange (exchange spectroscopy, EXSY) cross peaks for NP1sym(CN), NP3sym(CN) and NP4sym(CN) but not for NP2sym(CN). These changes in nonplanar conformation are visualized as a "rolling" of the ruffled macrocycle ridges through some number of degrees, the lowest-energy ruffling mode. This probably occurs in response to slow protein dynamics that cause the I120 and L132 side chains in the distal heme pocket to move in opposite directions (up and away vs. down and toward the hemin ring). This in turn changes the out-of-plane displacements of the 2M and 3M of the symmetrical hemin on the NMR timescale. Two other types of dynamics, i.e., changes in heme seating and NMeIm rotation, are also observed. The highly distorted heme and the dynamics it causes are unique to the NPs and a few other heme proteins with highly distorted macrocycles.
Shokhireva
Tatiana K
TK
Department of Chemistry, The University of Arizona, Tucson, AZ 85721-0041, USA.
Shokhirev
Nikolai V
NV
Berry
Robert E
RE
Zhang
Hongjun
H
Walker
F Ann
FA
D000818:Animals; D002247:Carbon Isotopes; D003486:Cyanides / Q000737:chemistry; D006418:Heme / Q000031:analogs & derivatives* / Q000737:chemistry*; D006420:Hemeproteins / Q000737:chemistry*; D006427:Hemin / Q000737:chemistry*; D007093:Imidazoles / Q000737:chemistry; D009682:Magnetic Resonance Spectroscopy / Q000379:methods* / Q000592:standards; D008956:Models, Chemical; D011487:Protein Conformation; D011522:Protons; D011789:Quantum Theory; D012015:Reference Standards; D012239:Rhodnius / Q000737:chemistry*; D012471:Salivary Proteins and Peptides / Q000737:chemistry*
D002247:Carbon Isotopes; D003486:Cyanides; D006420:Hemeproteins; D007093:Imidazoles; D011522:Protons; D012471:Salivary Proteins and Peptides; C090560:nitrophorin; D006418:Heme; D006427:Hemin; C018100:1-methylimidazole