title: Perturbational profiling of nanomaterial biologic activity.
abstract: Our understanding of the biologic effects (including toxicity) of nanomaterials is incomplete. In vivo animal studies remain the gold standard; however, widespread testing remains impractical, and the development of in vitro assays that correlate with in vivo activity has proven challenging. Here, we demonstrate the feasibility of analyzing in vitro nanomaterial activity in a generalizable, systematic fashion. We assessed nanoparticle effects in a multidimensional manner, using multiple cell types and multiple assays that reflect different aspects of cellular physiology. Hierarchical clustering of these data identifies nanomaterials with similar patterns of biologic activity across a broad sampling of cellular contexts, as opposed to extrapolating from results of a single in vitro assay. We show that this approach yields robust and detailed structure-activity relationships. Furthermore, a subset of nanoparticles were tested in mice, and nanoparticles with similar activity profiles in vitro exert similar effects on monocyte number in vivo. These data suggest a strategy of multidimensional characterization of nanomaterials in vitro that can inform the design of novel nanomaterials and guide studies of in vivo activity.
authors.affiliation: Broad Institute of Harvard and MIT, 7 Cambridge Center, Cambridge, MA 02142, USA.
authors.forename: Stanley Y
authors.initials: SY
authors.lastname: Shaw
authors.forename: Elizabeth C
authors.initials: EC
authors.lastname: Westly
authors.forename: Mikael J
authors.initials: MJ
authors.lastname: Pittet
authors.forename: Aravind
authors.initials: A
authors.lastname: Subramanian
authors.forename: Stuart L
authors.initials: SL
authors.lastname: Schreiber
authors.forename: Ralph
authors.initials: R
authors.lastname: Weissleder
mesh_terms: D000818:Animals; D001681:Biological Assay; D002460:Cell Line; D016000:Cluster Analysis; D006801:Humans; D008422:Materials Testing / Q000379:methods*; D051379:Mice; D008807:Mice, Inbred BALB C; D053758:Nanoparticles / Q000737:chemistry / Q000633:toxicity*; D013329:Structure-Activity Relationship