Characterization of microRNA-regulated protein-protein interaction network.
We have performed topological analysis to elucidate the global correlation between microRNA (miRNA) regulation and protein-protein interaction network in human. The analysis showed that target genes of individual miRNA tend to be hubs and bottlenecks in the network. While proteins directly regulated by miRNA might not form a network module themselves, the miRNA-target genes and their interacting neighbors jointly showed significantly higher modularity. Our findings shed light on how miRNA may regulate the protein interaction network.
Hsu
Chun-Wei
CW
Institute of Biomedical Informatics, Center for Systems and Synthetic Biology, National Yang-Ming University, Taipei, Taiwan.
Juan
Hsueh-Fen
HF
Huang
Hsuan-Cheng
HC
D053263:Gene Regulatory Networks; D006801:Humans; D035683:MicroRNAs / Q000378:metabolism*; D011485:Protein Binding; D025941:Protein Interaction Mapping / Q000379:methods*; D011506:Proteins / Q000235:genetics / Q000378:metabolism
D035683:MicroRNAs; D011506:Proteins