MADNet: microarray database network web server.
MADNet is a user-friendly data mining and visualization tool for rapid analysis of diverse high-throughput biological data such as microarray, phage display or even metagenome experiments. It presents biological information in the context of metabolic and signalling pathways, transcription factors and drug targets through minimal user input, consisting only of the file with the experimental data. These data are integrated with information stored in various biological databases such as NCBI nucleotide and protein databases, metabolic and signalling pathway databases (KEGG), transcription regulation (TRANSFAC(c)) and drug target database (DrugBank). MADNet is freely available for academic use at http://www.bioinfo.hr/madnet.
Segota
Igor
I
Bioinformatics Group, Division of Biology, Faculty of Science, Zagreb University, Horvatovac 102a, 10000 Zagreb, Croatia.
Bartonicek
Nenad
N
Vlahovicek
Kristian
K
D003196:Computer Graphics; D030541:Databases, Genetic; D020869:Gene Expression Profiling / Q000379:methods*; D020407:Internet; D053858:Metabolic Networks and Pathways / Q000235:genetics; D020411:Oligonucleotide Array Sequence Analysis / Q000379:methods*; D015398:Signal Transduction / Q000235:genetics; D012984:Software; D018511:Systems Integration; D014584:User-Computer Interface