title: Quantum mechanical model for information transfer from DNA to protein.
abstract: A model for the information transfer from DNA to protein using quantum information and computation techniques is presented. DNA is modeled as the sender and proteins are modeled as the receiver of this information. On the DNA side, a 64-dimensional Hilbert space is used to describe the information stored in DNA triplets (codons). A Hamiltonian matrix is constructed for this space, using the 64 possible codons as base states. The eigenvalues of this matrix are not degenerate. The genetic code is degenerate and proteins comprise only 20 different amino acids. Since information is conserved, the information on the protein side is also described by a 64-dimensional Hilbert space, but the eigenvalues of the corresponding Hamiltonian matrix are degenerate. Each amino acid is described by a Hilbert subspace. This change in Hilbert space structure reflects the nature of the processes involved in information transfer from DNA to protein.
authors.affiliation: Department of Electrical and Computer Engineering, Democritus University of Thrace, 67100 Xanthi, Greece. ykar@ee.duth.gr
authors.forename: Ioannis G
authors.initials: IG
authors.lastname: Karafyllidis
mesh_terms: D000596:Amino Acids / Q000737:chemistry; D003062:Codon / Q000737:chemistry; D004247:DNA / Q000737:chemistry*; D008954:Models, Biological; D011506:Proteins / Q000737:chemistry*; D011789:Quantum Theory
chemical_list: D000596:Amino Acids; D003062:Codon; D011506:Proteins; D004247:DNA