Protein domain annotation with predicted domain-domain interaction networks.
This paper presents a framework for annotating protein domains with predicted domain-domain interaction networks. Specially, domain annotation is formalized as a multi-class classification problem in this work. The numerical experiments on InterPro domains show promising results, which proves the efficiency of our proposed methods.
Zhao
Xing-Ming
XM
ERATO Aihara Complexity Modelling Project, JST, Tokyo 151-0064, Japan.
Wang
Yong
Y
Chen
Luonan
L
Aihara
Kazuyuki
K
D019295:Computational Biology / Q000379:methods*; D008433:Mathematics; D011336:Probability; D011485:Protein Binding; D025941:Protein Interaction Mapping; D017434:Protein Structure, Tertiary; D012680:Sensitivity and Specificity