GeConT 2: gene context analysis for orthologous proteins, conserved domains and metabolic pathways.
The Gene Context Tool (GeConT) allows users to visualize the genomic context of a gene or a group of genes and their orthologous relationships within fully sequenced bacterial genomes. The new version of the server incorporates information from the COG, Pfam and KEGG databases, allowing users to have an integrated graphical representation of the function of genes at multiple levels, their phylogenetic distribution and their genomic context. The sequence of any of the genes can be easily retrieved, as well as the 5' or 3' regulatory regions, greatly facilitating further types of analysis. GeConT 2 is available at: http://bioinfo.ibt.unam.mx/gecont.
Martinez-Guerrero
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Departmento de Microbiología Molecular, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos 62210, México.
Ciria
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Abreu-Goodger
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Moreno-Hagelsieb
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Merino
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D001419:Bacteria / Q000378:metabolism; D001426:Bacterial Proteins / Q000737:chemistry* / Q000235:genetics*; D003196:Computer Graphics; D017124:Conserved Sequence; D005798:Genes, Bacterial; D016680:Genome, Bacterial; D023281:Genomics; D020407:Internet; D017434:Protein Structure, Tertiary; D012984:Software
D001426:Bacterial Proteins