BioNessie(G) - a Grid enabled biochemical networks simulation environment.
The simulation of biochemical networks provides insight and understanding about the underlying biochemical processes and pathways used by cells and organisms. BioNessie is a biochemical network simulator which has been developed at the University of Glasgow. This paper describes the simulator and focuses in particular on how it has been extended to benefit from a wide variety of high performance compute resources across the UK through Grid technologies to support larger scale simulations.
Liu
Xuan
X
Bioinformatics Research Centre, University of Glasgow, Glasgow, Scotland, UK. xliu@dcs.gla.ac.uk
Jiang
Jipu
J
Ajayi
Oluwafemi
O
Gu
Xu
X
Gilbert
David
D
Sinnott
Richard
R
D001671:Biochemistry / Q000458:organization & administration*; D003195:Computer Communication Networks / Q000458:organization & administration*; D003198:Computer Simulation; D019992:Databases as Topic; D006801:Humans; D012984:Software; D049490:Systems Biology / Q000458:organization & administration*; D006113:United Kingdom