Anni 2.0: a multipurpose text-mining tool for the life sciences.
Anni 2.0 is an online tool (http://biosemantics.org/anni/) to aid the biomedical researcher with a broad range of information needs. Anni provides an ontology-based interface to MEDLINE and retrieves documents and associations for several classes of biomedical concepts, including genes, drugs and diseases, with established text-mining technology. In this article we illustrate Anni's usability by applying the tool to two use cases: interpretation of a set of differentially expressed genes, and literature-based knowledge discovery.
Department of Medical Informatics, Erasmus MC University Medical Center, Dr, Molewaterplein, Rotterdam, 3015 GE, The Netherlands. r.jelier@erasmusmc.nl.
Rob
R
Jelier
Martijn J
MJ
Schuemie
Antoine
A
Veldhoven
Lambert C J
LC
Dorssers
Guido
G
Jenster
Jan A
JA
Kors
D000043:Abstracting and Indexing; D016247:Information Storage and Retrieval / Q000379:methods*; D016239:MEDLINE; D012984:Software