title: [Biochemical selenocysteine synthesis and the phylogenic study].
abstract: Selenium (Se) is an essential trace element. Se is found as selenocysteine (Sec) in Se-proteins. Sec is the 21(st) amino acid, because Sec has its tRNA, the codon UGA and those components in its translational machinery. Sec UGA codon shares with major stop codon UGA. We purified Sec synthesizing enzymes, such as seryl-tRNA synthetase (SerRS), Sec synthetase (SecS) and selenophosphate synthetase (SePS). I described the procedures to prepare Sec tRNA, SerRS, SecS, SePS and [(75)Se]H(2)Se in detail. We clarified that SecS composed of two proteins, SecSalpha and SecSbeta. Sec synthesizing and incorporating systems present in Monela, Animalia and Protoctista but not in Plantae and Fungi. We showed that protozoa had Sec tRNA on which Sec was synthesized from Ser-tRNA by bovine and protozoa SecS. Some worms, such as Caenorhabditis elegans and Fasiola gigantica, also had Sec tRNA on which Sec was synthesized by bovine liver SecS or C. elegans enzymes. We showed recognition sites of mammalian Sec tRNA by SecS. The identity units of Sec tRNA are 9 bp aminoacyl- and 6 bp D-stems. This recognition is not the base-specific manner but the length-specific manner. From comparison of the phylogeny trees of Sec synthesizing system and translation system, we concluded that the evolution of Sec synthesizing system is older than that of the translation system.
authors.affiliation: Graduate School of Pharmaceutical Sciences, Nagoya City University, Nagoya, Japan. takaharu@mbr.nifty.com
authors.forename: Takaharu
authors.initials: T
authors.lastname: Mizutani
authors.forename: Takashi
authors.initials: T
authors.lastname: Osaka
authors.forename: Toshinobu
authors.initials: T
authors.lastname: Fujiwara
authors.forename: M
authors.initials: M
authors.lastname: Shahidzzman
mesh_terms: D000818:Animals; D018388:Codon, Terminator; D010710:Phosphates; D010770:Phosphotransferases; D010802:Phylogeny; D012343:RNA, Transfer; D012643:Selenium; D018036:Selenium Compounds; D017279:Selenocysteine / Q000096:biosynthesis* / Q000235:genetics; D014166:Transferases
chemical_list: D018388:Codon, Terminator; D010710:Phosphates; D018036:Selenium Compounds; D017279:Selenocysteine; C076818:selenophosphate; D012343:RNA, Transfer; D014166:Transferases; D010770:Phosphotransferases; C062762:selenophosphate synthetase; C060600:selenium transferase; D012643:Selenium