title: Proteomic profiling of cellular targets of lipopolysaccharide-induced signalling in Nicotiana tabacum BY-2 cells.
abstract: Plants constantly monitor for pathogen challenge and utilize a diverse array of adaptive defense mechanisms, including differential protein regulation, during pathogen attack. A proteomic analysis of Nicotiana tabacum BY-2 cells was performed in order to investigate the dynamic changes following perception of bacterial lipopolysaccharides. A multiplexed proteome analysis, employing two-dimensional difference-in-gel-electrophoresis with CyDye DIGE fluors, as well as Ruthenium II tris (bathophenanthroline disulfonate) fluorescence staining and Pro-Q Diamond phosphoprotein-specific gel staining, monitored over 1500 proteins and resulted in the identification of 88 differentially regulated proteins and phosphoproteins responsive to LPS(B.cep.)-elicitation. Functional clustering of the proteins both at the level of their abundance and phosphorylation status, revealed 9 proteins involved in transport, ion homeostasis and signal transduction. A large number of responsive proteins were found to be involved in metabolism- and energy-related processes (36), representing various metabolic pathways. Another abundant category corresponded to proteins classified as molecular chaperones and involved in protein destination/targeting (12). Other categories of proteins found to be LPS(B.cep.)-responsive and differentially regulated include cell structure- and cytoskeletal rearrangement proteins (8) and proteins involved in transcription and translation as well as degradation (11). The results indicate that LPS(B.cep.) induces metabolic reprogramming and changes in cellular activities supporting protein synthesis, -folding, vesicle trafficking and secretion; accompanied by changes to the cytoskeleton and proteosome function. Many of the identified proteins are known to be interconnected at various levels through a complex web of activation/deactivation, complex formation, protein-protein interactions, and chaperoning reactions. The presented data offers novel insights and further evidence for the biochemical action of LPS(B.cep.) as a resistance elicitor, a pathogen-associated molecular pattern molecule and triggering agent of defense responses associated with innate immunity.
authors.affiliation: Department of Biochemistry, University of Johannesburg, P.O. Box 524, Auckland Park, 2006, South Africa.
authors.forename: Isak B
authors.initials: IB
authors.lastname: Gerber
authors.forename: Kris
authors.initials: K
authors.lastname: Laukens
authors.forename: Thomas
authors.initials: T
authors.lastname: De Vijlder
authors.forename: Erwin
authors.initials: E
authors.lastname: Witters
authors.forename: Ian A
authors.initials: IA
authors.lastname: Dubery
mesh_terms: D016956:Burkholderia cepacia / Q000737:chemistry; D018929:Cell Culture Techniques; D002460:Cell Line; D015180:Electrophoresis, Gel, Two-Dimensional; D007113:Immunity, Innate / Q000187:drug effects / Q000502:physiology; D008070:Lipopolysaccharides / Q000302:isolation & purification / Q000494:pharmacology*; D008954:Models, Biological; D010750:Phosphoproteins / Q000032:analysis / Q000378:metabolism; D020543:Proteome / Q000032:analysis / Q000187:drug effects*; D040901:Proteomics / Q000379:methods; D015398:Signal Transduction / Q000187:drug effects; D014026:Nicotiana / Q000187:drug effects* / Q000276:immunology / Q000378:metabolism*; D054928:Validation Studies as Topic
chemical_list: D008070:Lipopolysaccharides; D010750:Phosphoproteins; D020543:Proteome