title: Sequential anisotropic multichannel Wiener filtering with Rician bias correction applied to 3D regularization of DWI data.
abstract: It has been shown that the tensor calculation is very sensitive to the presence of noise in the acquired images, yielding to very low quality Diffusion Tensor Images (DTI) data. Recent investigations have shown that the noise present in the Diffusion Weighted Images (DWI) causes bias effects on the DTI data which cannot be corrected if the noise characteristic is not taken into account. One possible solution is to increase the minimum number of acquired measurements (which is 7) to several tens (or even several hundreds). This has the disadvantage of increasing the acquisition time by one (or two) orders of magnitude, making the process inconvenient for a clinical setting. We here proposed a turn-around procedure for which the number of acquisitions is maintained but, the DWI data are filtered prior to determining the DTI. We show a significant reduction on the DTI bias by means of a simple and fast procedure which is based on linear filtering; well-known drawbacks of such filters are circumvented by means of anisotropic neighborhoods and sequential application of the filter itself. Information of the first order probability density function of the raw data, namely, the Rice distribution, is also included. Results are shown both for synthetic and real datasets. Some error measurements are determined in the synthetic experiments, showing how the proposed scheme is able to reduce them. It is worth noting a 50% increase in the linear component for real DTI data, meaning that the bias in the DTI is considerably reduced. A novel fiber smoothness measure is defined to evaluate the resulting tractography for real DWI data. Our findings show that after filtering, fibers are considerably smoother on the average. Execution times are very low as compared to other reported approaches which allows for a real-time implementation.
authors.affiliation: Laboratorio de Procesado de Imagen (LPI), Universidad de Valladolid, Valladolid, Spain. marcma@tel.uva.es
authors.forename: M
authors.initials: M
authors.lastname: Martin-Fernandez
authors.forename: E
authors.initials: E
authors.lastname: Muñoz-Moreno
authors.forename: L
authors.initials: L
authors.lastname: Cammoun
authors.forename: J-P
authors.initials: JP
authors.lastname: Thiran
authors.forename: C-F
authors.initials: CF
authors.lastname: Westin
authors.forename: C
authors.initials: C
authors.lastname: Alberola-López
mesh_terms: D000465:Algorithms; D016880:Anisotropy; D016477:Artifacts; D001921:Brain / Q000033:anatomy & histology*; D038524:Diffusion Magnetic Resonance Imaging / Q000379:methods*; D006801:Humans; D007089:Image Enhancement / Q000379:methods*; D007090:Image Interpretation, Computer-Assisted / Q000379:methods*; D010363:Pattern Recognition, Automated / Q000379:methods*; D015203:Reproducibility of Results; D012680:Sensitivity and Specificity; D012815:Signal Processing, Computer-Assisted