title: A novel ARID DNA-binding protein interacts with SymRK and is expressed during early nodule development in Lotus japonicus.
abstract: During the establishment of symbiosis in legume roots, the rhizobial Nod factor signal is perceived by the host cells via receptor-like kinases, including SymRK. The NODULE INCEPTION (NIN) gene in Lotus japonicus is required for rhizobial entry into root cells and for nodule organogenesis. We describe here a novel DNA-binding protein from L. japonicus, referred to as SIP1, because it was identified as a SymRK-interacting protein. SIP1 contains a conserved AT-rich interaction domain (ARID) and represents a unique member of the ARID-containing proteins in plants. The C terminus of SIP1 was found to be responsible for its interaction with the kinase domain of SymRK and for homodimerization in the absence of DNA. SIP1 specifically binds to the promoter of LjNIN but not to that of LjCBP1 (a calcium-binding protein gene), both of which are known to be inducible by Nod factors. SIP1 recognizes two of the three AT-rich domains present in the NIN gene promoter. Deletion of one of the AT-rich domains at the NIN promoter diminishes the binding of SIP1 to the NIN promoter. The protein is localized to the nuclei when expressed as a red fluorescence fusion protein in the onion (Allium cepa) epidermal cells. The SIP1 gene is expressed constitutively in the uninfected roots, and its expression levels are elevated after infection by Mesorhizobium loti. It is proposed that SIP1 may be required for the expression of NIN and involved in the initial communications between the rhizobia and the host root cells.
authors.affiliation: State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan 430070, China.
authors.forename: Hui
authors.initials: H
authors.lastname: Zhu
authors.forename: Tao
authors.initials: T
authors.lastname: Chen
authors.forename: Maosheng
authors.initials: M
authors.lastname: Zhu
authors.forename: Qing
authors.initials: Q
authors.lastname: Fang
authors.forename: Heng
authors.initials: H
authors.lastname: Kang
authors.forename: Zonglie
authors.initials: Z
authors.lastname: Hong
authors.forename: Zhongming
authors.initials: Z
authors.lastname: Zhang
mesh_terms: D000595:Amino Acid Sequence; D004247:DNA / Q000378:metabolism; D004268:DNA-Binding Proteins / Q000378:metabolism*; D019281:Dimerization; D015870:Gene Expression; D000070116:Lotus / Q000254:growth & development / Q000378:metabolism* / Q000382:microbiology; D008969:Molecular Sequence Data; D010940:Plant Proteins / Q000378:metabolism; D011401:Promoter Regions, Genetic; D054730:Protein Interaction Domains and Motifs; D053204:Root Nodules, Plant / Q000254:growth & development* / Q000382:microbiology; D014157:Transcription Factors / Q000378:metabolism*; D015533:Transcriptional Activation
chemical_list: D004268:DNA-Binding Proteins; C403406:NIN protein, Lotus japonicus; D010940:Plant Proteins; D014157:Transcription Factors; D004247:DNA