MeV+R: using MeV as a graphical user interface for Bioconductor applications in microarray analysis.
We present MeV+R, an integration of the JAVA MultiExperiment Viewer program with Bioconductor packages. This integration of MultiExperiment Viewer and R is easily extensible to other R packages and provides users with point and click access to traditionally command line driven tools written in R. We demonstrate the ability to use MultiExperiment Viewer as a graphical user interface for Bioconductor applications in microarray data analysis by incorporating three Bioconductor packages, RAMA, BRIDGE and iterativeBMA.
Chu
Vu T
VT
Department of Microbiology, University of Washington, Seattle, WA 98195, USA. vudu@u.washington.edu
Gottardo
Raphael
R
Raftery
Adrian E
AE
Bumgarner
Roger E
RE
Yeung
Ka Yee
KY
D001499:Bayes Theorem; D003196:Computer Graphics; D020869:Gene Expression Profiling; D020411:Oligonucleotide Array Sequence Analysis; D012984:Software; D018511:Systems Integration; D014584:User-Computer Interface