Completion of the sequence of rice gall dwarf virus from Guangxi, China.
The complete nucleotide sequences of segments S2, S3, S5, and S8-S11 of a Rice gall dwarf virus isolate from Guangxi Province, China, (RGDV-GX) were determined, completing the sequence of this isolate. The total genome (25,567nt) was similar in organization to a recently reported Thailand isolate (RGDV-T). A previously unreported second segment-specific repeat of 7 or 8nt was detected close to the 3'-end of segments S3, S5, and S8. The 3'-UTR of RGDV-GX S4 was 139nt shorter than that of RGDV-T; the insertion in RGDV-T contains a 34-nt inverted repeat, with the 3'-terminus probably abolishing the expected stem loop structure.
Zhang
Heng-Mu
HM
Institute of Virology and Biotechnology, Zhejiang Academy of Agricultural Sciences, 310021 Hangzhou, People's Republic of China. zhhengmu@tsinghua.org.cn
Xin
Xing
X
Yang
Jian
J
Chen
Jian-Ping
JP
Wang
Jian-Ming
JM
Adams
M J
MJ
D020413:3' Untranslated Regions; D000595:Amino Acid Sequence; D001483:Base Sequence; D002681:China; D016679:Genome, Viral; D008969:Molecular Sequence Data; D012275:Oryza / Q000821:virology*; D010935:Plant Diseases / Q000821:virology*; D010941:Plant Tumors / Q000821:virology*; D012087:Reoviridae / Q000235:genetics* / Q000302:isolation & purification; D016415:Sequence Alignment; D017422:Sequence Analysis, DNA
D020413:3' Untranslated Regions