title: Rifampicin resistance phenotyping of Brucella melitensis by rpoB gene analysis in clinical isolates.
abstract: R Rifampicin resistance of Brucella melitensis by rpoB gene analysis has not yet been performed in Turkey, where brucellosis is endemic. In this study, we investigated the efficacy of E-test and single nucleotide polymorphism (SNP) analysis of the B. melitensis rpoB gene, for the detection of mutations conferring rifampicin resistance, by sequencing 21 human B. melitensis strains from the Southeast and Marmara regions of Turkey. On CLSI slow-growing bacteria standards, all isolates were sensitive to rifampicin except for 6 which showed intermediate resistance to rifampicin. MIC(50) and MIC(90)values were 1 microg/ml and 1.5 microg/ml respectively (range 0.50 -1.5 microg/ml). The rifampicin-resistant phenotype was investigated at Cd 154 (GTT/TTT), Cd 526 (GAC/TAC, GAC/AAC, GAC/GGC), Cd 536 (CAC/CTC, CAC/TAC), Cd 539 (CGC/AGC), Cd 541 (TCG/TTG) and Cd 574 (CCG/CTG) of the rpoB gene in B. melitensis 16M and B115 strains, and in clinical isolates. No missense mutations were found in any of the B. melitensis isolates, which indicates that all isolates were rifampicin-susceptible. In conclusion, SNP analysis was useful as a molecular tool for rifampin resistance testing. Although resistance to rifampicin was not detected in our strains of B. melitensis; the presence of strains with intermediate resistance to rifampicin indicates that susceptibility testing should be performed periodically.
authors.affiliation: Clinical Laboratory, PCR Unit, Faculty of Medicine, Kocaeli University, Kocaeli, Turkey. sayanmurat@hotmail.com <sayanmurat@hotmail.com>
authors.forename: M
authors.initials: M
authors.lastname: Sayan
authors.forename: Z
authors.initials: Z
authors.lastname: Yumuk
authors.forename: D
authors.initials: D
authors.lastname: Dündar
authors.forename: O
authors.initials: O
authors.lastname: Bilenoglu
authors.forename: S
authors.initials: S
authors.lastname: Erdenlig
authors.forename: E
authors.initials: E
authors.lastname: Yaşar
authors.forename: A
authors.initials: A
authors.lastname: Willke
mesh_terms: D000904:Antibiotics, Antitubercular / Q000494:pharmacology*; D017347:Brucella melitensis / Q000187:drug effects* / Q000235:genetics* / Q000302:isolation & purification; D004305:Dose-Response Relationship, Drug; D024881:Drug Resistance, Bacterial / Q000235:genetics*; D005798:Genes, Bacterial; D006801:Humans; D008826:Microbial Sensitivity Tests; D009154:Mutation; D010641:Phenotype; D020641:Polymorphism, Single Nucleotide; D012293:Rifampin / Q000494:pharmacology*
chemical_list: D000904:Antibiotics, Antitubercular; D012293:Rifampin