VistaClara: an expression browser plug-in for Cytoscape.
CONCLUSIONS
VistaClara is a plug-in for Cytoscape which provides a more flexible means to visualize gene and protein expression within a network context. An extended attribute browser is provided in the form of a graphical and interactive permutation matrix that resembles the heat map displays popular in gene-expression analysis. This extended browser permits a variety of display options and interactions not currently available in Cytoscape.


BACKGROUND
http://chianti.ucsd.edu/cyto_web/plugins/index.php.
Kincaid
Robert
R
Agilent Laboratories, Santa Clara, CA 95051, USA. robert_kincaid@agilent.com
Kuchinsky
Allan
A
Creech
Michael
M
D019295:Computational Biology / Q000379:methods*; D003196:Computer Graphics; D030541:Databases, Genetic; D030562:Databases, Protein; D015870:Gene Expression; D012984:Software; D014584:User-Computer Interface