Visualizing phylogenetic trees using TreeView.
TreeView provides a simple way to view the phylogenetic trees produced by a range of programs, such as PAUP*, PHYLIP, TREE-PUZZLE, and ClustalX. While some phylogenetic programs (such as the Macintosh version of PAUP*) have excellent tree printing facilities, many programs do not have the ability to generate publication quality trees. TreeView addresses this need. The program can read and write a range of tree file formats, display trees in a variety of styles, print trees, and save the tree as a graphic file. Protocols in this unit cover both displaying and printing a tree. Support protocols describe how to download and install TreeView, and how to display bootstrap values in trees generated by ClustalX and PAUP*.
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Roderic D M
RD
University of Glasgow, Glasgow, Scotland.
D000465:Algorithms; D003196:Computer Graphics; D003198:Computer Simulation; D016247:Information Storage and Retrieval / Q000379:methods*; D008957:Models, Genetic; D010802:Phylogeny; D012984:Software; D014584:User-Computer Interface