title: Expression of glutathione S-transferases in poplar trees (Populus trichocarpa) exposed to 2,4,6-trinitrotoluene (TNT).
abstract: Twelve Populus genes were identified from Arabidopsis thaliana sequences previously shown to be induced by exposure to 2,4,6-trinitrotoluene (TNT). Using the resources of the Poplar Genome Project and National Center for Biotechnology Information databases, Populus conserved domains were identified and used to design gene specific primers. RNA extracted from root tissues of TNT-exposed hydroponic poplar plants was used to quantify the expression of genes by reverse-transcriptase real-time polymerase chain reaction. Cyclophilin and 18S ribosomal DNA genes were used as internal standards. Exposure to TNT resulted in a significant increase of gene expression of two glutathione S-transferases (GST), peaking at levels of 25.0 +/- 13.1 and 10 +/- 0.7 fold the expression level of non-exposed plants after 24 h for each of the GST genes, respectively. This paper demonstrates the use of functional genomics information from the model plant species, Arabidopsis, to identify genes which may be important in detoxification of TNT in the model phytoremediation species, Populus trichocarpa.
authors.affiliation: Department of Civil and Environmental Engineering, The University of Iowa, Iowa City, IA 52242.
authors.forename: Laura B
authors.initials: LB
authors.lastname: Brentner
authors.forename: Sachiyo T
authors.initials: ST
authors.lastname: Mukherji
authors.forename: Kate M
authors.initials: KM
authors.lastname: Merchie
authors.forename: Jong Moon
authors.initials: JM
authors.lastname: Yoon
authors.forename: Jerald L
authors.initials: JL
authors.lastname: Schnoor
authors.forename: Benoit
authors.initials: B
authors.lastname: Van Aken
mesh_terms: D001673:Biodegradation, Environmental; D018744:DNA, Plant / Q000378:metabolism; D053834:Explosive Agents / Q000378:metabolism / Q000494:pharmacology*; D018506:Gene Expression Regulation, Plant; D017343:Genes, Plant; D018745:Genome, Plant; D005982:Glutathione Transferase / Q000235:genetics* / Q000378:metabolism; D032107:Populus / Q000187:drug effects / Q000201:enzymology* / Q000378:metabolism; D014303:Trinitrotoluene / Q000378:metabolism / Q000494:pharmacology*
chemical_list: D018744:DNA, Plant; D053834:Explosive Agents; D014303:Trinitrotoluene; D005982:Glutathione Transferase