POPE--a tool to aid high-throughput phylogenetic analysis.
POPE (Phylogeny, Ortholog and Paralog Extractor) provides an integrated platform for automatic ortholog identification. Intermediate steps can be visualized, modified and analyzed in order to assess and improve the underlying quality of orthology and paralogy assignments.


BACKGROUND
POPE is available for download from the website: http://www.well.ox.ac.uk/~tota/pope.
Juliusdottir
Thorhildur
T
Wellcome Trust Centre for Human Genetics, Roosevelt Drive, Oxford, OX3 7BN, UK. tota@well.ox.ac.uk
Pettersson
Fredrik
F
Copley
Richard R
RR
D019295:Computational Biology; D030541:Databases, Genetic; D019143:Evolution, Molecular; D010802:Phylogeny; D017422:Sequence Analysis, DNA; D012984:Software