Structural basis of beta-catenin recognition by Tax-interacting protein-1.
Tax-interacting protein-1 (TIP-1) is an unusual signaling protein, containing a single PDZ domain. TIP-1 is able to bind beta-catenin with high affinity and thus inhibit its transcriptional activity. The high-resolution crystal structure of TIP-1 in complex with the C-terminal peptide of beta-catenin provides molecular details for the recognition of beta-catenin by TIP-1. Moreover, structural comparison of peptide-free and peptide-bound TIP-1 reveals that significant conformational changes are required in the betaB-betaC loop region of TIP-1 to avoid clashes with the incoming C-terminal beta-catenin peptide. Such conformational changes have not been observed in other structures of PDZ domains. In addition to the canonical peptide-binding pocket of the PDZ domain, TIP-1 can form a binding cavity to anchor more amino acids through a conserved hydrophobic residue pair (Trp776 of beta-catenin and Pro45 of TIP-1). Structural and biochemical data indicate that the canonical binding pocket together with the hydrophobic residue pair are presumably the major cause of the significantly higher affinity of the beta-catenin C-terminal to TIP-1 than to other PDZ domains, providing a unique binding specificity. Our results reveal the molecular mechanism of TIP-1 as an antagonist in PDZ domain signaling.
Zhang
Jinxiu
J
Tianjin Key Laboratory of Protein Science, College of Life Science, NanKai University, Tianjin 300071, China.
Yan
Xiaojie
X
Shi
Chaowei
C
Yang
Xue
X
Guo
Yu
Y
Tian
Changlin
C
Long
Jiafu
J
Shen
Yuequan
Y
D000595:Amino Acid Sequence; D000818:Animals; D018360:Crystallography, X-Ray; D057927:Hydrophobic and Hydrophilic Interactions; D047908:Intracellular Signaling Peptides and Proteins / Q000737:chemistry* / Q000378:metabolism*; D051379:Mice; D008958:Models, Molecular; D008969:Molecular Sequence Data; D009363:Neoplasm Proteins / Q000737:chemistry* / Q000378:metabolism*; D010455:Peptides / Q000737:chemistry / Q000378:metabolism; D011485:Protein Binding; D017433:Protein Structure, Secondary; D017434:Protein Structure, Tertiary; D051176:beta Catenin / Q000737:chemistry* / Q000378:metabolism*
D047908:Intracellular Signaling Peptides and Proteins; D009363:Neoplasm Proteins; D010455:Peptides; C523855:TAX1BP1 protein, mouse; D051176:beta Catenin