title: Epidemiological study of E. coli O157:H7 isolated in Northern Ireland using pulsed-field gel electrophoresis (PFGE).
abstract: In Northern Ireland over the last 7 years, there is a mean of 41.9 laboratory reports per annum of human gastrointestinal infection (range 19-54) caused by Escherichia coli O157:H7. In the preceding years 1992-1996, reports were 5.4 per annum, whereas in 1997-2000, reports increased from 30 to 54 per annum. This high level has continued on an annual basis to date. The aim of this study was therefore to retrospectively examine this period of exponential increase in reports to help ascertain the genetic relatedness of strains employing pulsed-field gel electrophoresis (PFGE), as no data on the molecular epidemiology of E. coli O157:H7 in Northern Ireland has yet been published. Clinical isolates (n=84) were PFGE typed employing XbaI digestion and resulting band profiles demonstrated the presence of 13, 9 and 16 clonal types, for 1997, 1998 and 1999, respectively. In 1998, five clonal types remained from 1997 with the introduction of 4 new clonal types, whereas in 1999, 10 new clonal types were observed, accounting for over half (58%) of the E. coli O157 isolates for that year. These data suggest that, unlike gastrointestinal infections due to thermophilic campylobacters, there was considerable genetic evolution ofPFGE clonal types of E. coli O157, through the displacement and emergence of genotypes. Further studies are now required to find the environmental reservoirs of these common clonal types of clinical E. coli O157:H7 in Northern Ireland to help define sources and routes of transmission of this infection locally.
authors.affiliation: Northern Ireland Public Health Laboratory, Department of Bacteriology, Belfast City Hospital, Lisburn Road, Belfast, Northern Ireland.
authors.forename: Miyuki
authors.initials: M
authors.lastname: Watabe
authors.forename: Graham M
authors.initials: GM
authors.lastname: Hogg
authors.forename: B Cherie
authors.initials: BC
authors.lastname: Millar
authors.forename: Lester
authors.initials: L
authors.lastname: Crothers
authors.forename: Paul J
authors.initials: PJ
authors.lastname: Rooney
authors.forename: Anne
authors.initials: A
authors.lastname: Loughrey
authors.forename: Colin E
authors.initials: CE
authors.lastname: Goldsmith
authors.forename: M Ann S
authors.initials: MA
authors.lastname: McMahon
authors.forename: David A
authors.initials: DA
authors.lastname: Mcdowell
authors.forename: John E
authors.initials: JE
authors.lastname: Moore
mesh_terms: D016521:Electrophoresis, Gel, Pulsed-Field / Q000379:methods; D004927:Escherichia coli Infections / Q000453:epidemiology* / Q000235:genetics*; D019453:Escherichia coli O157 / Q000235:genetics*; D006801:Humans; D017720:Molecular Epidemiology; D009660:Northern Ireland / Q000453:epidemiology; D012189:Retrospective Studies