title: A theoretical study of medium effects on the structure of the glycine analogue aminomethylphosphonic acid.
abstract: alpha-Aminophosphonic acids are analogues of natural alpha-aminoacids and very promising agents for use in various pharmaceutical applications. However, in contrast to the numerous theoretical investigations on the structure of natural alpha-aminoacids, only very few studies on alpha-aminophosphonic acids have been performed. In the present work, we report a detailed investigation of the simplest compound, the glycine analogue aminomethylphosphonic acid (AMPA), by means of quantum mechanical calculations at the B3LYP/6-311++G(3df,2p)//B3LYP/6-31+G(d,p) and MP2/6-311++G(3df,2p)//B3LYP/6-31+G(d,p) levels. We focus on the structure of the neutral species looking at the evolution of non-ionized and ionized forms from gas phase to non-polar solvents and aqueous media. Continuum and discrete-continuum solvent models have been employed to account for the effects of the environment. The discussion is centered on: (1) the geometry and relative stability of possible conformers in gas phase and aqueous solution, (2) the free energy of tautomerization in different media, (3) the role of hydrogen bonds in liquid water, and (4) the free energy of transfer from water to a hydrophobic solvent such as cyclohexane. Systematic comparison between AMPA and Gly is performed. Though both systems exhibit many similarities, some important differences have also been found that may be explained, at least in part, by the higher acidity of phosphonic acids compared to carboxylic acids. In particular, in solvents lacking hydrogen-bond formation capability, Gly derivatives should mainly exist as non-ionized molecules while the equivalent AMPA derivatives should adopt a zwitterionic structure in media with dielectric constant above 10. This might have significant environmental or biological consequences that will need to be addressed.
authors.affiliation: Theoretical Chemistry and Biochemistry group, SRSMC, Nancy-University, CNRS, BP 239, 54506, Vandoeuvre-lès-Nancy Cedex, France.
authors.forename: Nasséra
authors.initials: N
authors.lastname: Benbrahim
authors.forename: Ali
authors.initials: A
authors.lastname: Rahmouni
authors.forename: Manuel F
authors.initials: MF
authors.lastname: Ruiz-López
mesh_terms: D003198:Computer Simulation; D005998:Glycine / Q000031:analogs & derivatives* / Q000737:chemistry*; D006860:Hydrogen Bonding; D007555:Isoxazoles; D008956:Models, Chemical; D015394:Molecular Structure; D063065:Organophosphonates / Q000737:chemistry*; D011789:Quantum Theory; D013777:Tetrazoles
chemical_list: D007555:Isoxazoles; D063065:Organophosphonates; D013777:Tetrazoles; C418233:2-amino-3-(3-hydrox-5(2-methyl-2H-tetrazol-5-yl)isoxazol-4-yl)propionic acid; D005998:Glycine