Age-dependent variability in gene expression in male Fischer 344 rat retina.
Recent evidence suggests that older adults may be a sensitive population with regard to environmental exposure to toxic compounds. One source of this sensitivity could be an enhanced variability in response. Studies on phenotypic differences have suggested that variation in response does increase with age. However, few reports address the question of variation in gene expression as an underlying cause for increased variability of phenotypic response in the aged. In this study, we utilized global analysis to compare variation in constitutive gene expression in the retinae of young (4 months), middle-aged (11 months), and aged (23 months) Fischer 344 rats. Three hundred and forty transcripts were identified in which variance in expression increased from 4 to 23 months of age, while only 12 transcripts were found for which it decreased. Functional roles for identified genes were clustered in basic biological categories including cell communication, function, metabolism, and response to stimuli. Our data suggest that population stochastically induced variability should be considered in assessing sensitivity due to old age.
Li
Zhen
Z
Department of Biostatistics, Carolina Environmental Bioinformatics Center, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.
Wright
Fred A
FA
Royland
Joyce
J
D000367:Age Factors; D000704:Analysis of Variance; D000818:Animals; D002450:Cell Communication / Q000235:genetics; D048708:Cell Growth Processes / Q000235:genetics; D016000:Cluster Analysis; D030541:Databases, Genetic; D005136:Eye Proteins / Q000235:genetics; D015870:Gene Expression / Q000235:genetics*; D005796:Genes / Q000235:genetics / Q000502:physiology; D008297:Male; D053858:Metabolic Networks and Pathways / Q000235:genetics; D020411:Oligonucleotide Array Sequence Analysis / Q000379:methods; D051381:Rats; D011916:Rats, Inbred F344; D012160:Retina / Q000378:metabolism*
D005136:Eye Proteins