title: The properties and functions of virus encoded microRNA, siRNA, and other small noncoding RNAs.
abstract: microRNAs (miRNAs) represent a class of noncoding RNA species, believed to be regulating gene expression by binding to complementary sites in the 3'UTRs of target mRNAs. They play important regulatory roles in various metabolic pathways in most eukaryotes. The recent discovery of virus encoded miRNAs suggests that viruses may be using them to regulate host and viral gene expression. Another class of closely related small interfering RNAs (siRNAs) also has been found within the HIV-1 genome and shown to be exerting a limited impact on virus reproduction. Additionally, an additional type of viral noncoding RNAs named small noncoding RNAs (sncRNAs) ranging from a few tens to a few hundred nucleotides in length, has also been identified. sncRNAs have a wide phylogenesis and high levels of expression, suggesting they may play an important roles in different species. Here we discuss the genomic organization, expression, conservation as well as potential function of virally encoded miRNA, siRNA, and sncRNAs.
authors.affiliation: Department of Liver Surgery, Peking Union Medical College Hospital, Chinese Academy of Medical Science, CAMS & PUMC, Chinese Academy of Science, Beijing, China.
authors.forename: Shunmin
authors.initials: S
authors.lastname: He
authors.forename: Zhen
authors.initials: Z
authors.lastname: Yang
authors.forename: Geir
authors.initials: G
authors.lastname: Skogerbo
authors.forename: Fei
authors.initials: F
authors.lastname: Ren
authors.forename: Hongliang
authors.initials: H
authors.lastname: Cui
authors.forename: Haitao
authors.initials: H
authors.lastname: Zhao
authors.forename: Runsheng
authors.initials: R
authors.lastname: Chen
authors.forename: Yi
authors.initials: Y
authors.lastname: Zhao
mesh_terms: D015967:Gene Expression Regulation, Viral; D035683:MicroRNAs / Q000235:genetics*; D034741:RNA, Small Interfering / Q000235:genetics*; D022661:RNA, Untranslated / Q000235:genetics*; D012367:RNA, Viral / Q000235:genetics*; D014779:Virus Replication; D014780:Viruses / Q000235:genetics*
chemical_list: D035683:MicroRNAs; D034741:RNA, Small Interfering; D022661:RNA, Untranslated; D012367:RNA, Viral