title: A molecular phylogeny of the genus Alloteropsis (Panicoideae, Poaceae) suggests an evolutionary reversion from C4 to C3 photosynthesis.
abstract: OBJECTIVE
  The grass Alloteropsis semialata is the only plant species with both C(3) and C(4) subspecies. It therefore offers excellent potential as a model system for investigating the genetics, physiology and ecological significance of the C(4) photosynthetic pathway. Here, a molecular phylogeny of the genus Alloteropsis is constructed to: (a) confirm the close relationship between the C(3) and C(4) subspecies of A. semialata; and (b) infer evolutionary relationships between species within the Alloteropsis genus.
  
  
  METHODS
  The chloroplast gene ndhF was sequenced from 12 individuals, representing both subspecies of A. semialata and all four of the other species in the genus. ndhF sequences were added to those previously sequenced from the Panicoideae, and used to construct a phylogenetic tree.
  
  
  RESULTS
  The phylogeny confirms that the two subspecies of A. semialata are among the most recently diverging lineages of C(3) and C(4) taxa currently recognized within the Panicoideae. Furthermore, the position of the C(3) subspecies of A. semialata within the Alloteropsis genus is consistent with the hypothesis that its physiology represents a reversion from C(4) photosynthesis. The data point to a similar evolutionary event in the Panicum stenodes-P. caricoides-P. mertensii clade. The Alloteropsis genus is monophyletic and occurs in a clade with remarkable diversity of photosynthetic biochemistry and leaf anatomy.
  
  
  CONCLUSIONS
  These results confirm the utility of A. semialata as a model system for investigating C(3) and C(4) physiology, and provide molecular data that are consistent with reversions from C(4) to C(3) photosynthesis in two separate clades. It is suggested that further phylogenetic and functional investigations of the Alloteropsis genus and closely related taxa are likely to shed new light on the mechanisms and intermediate stages underlying photosynthetic pathway evolution.
authors.affiliation: Department of Animal and Plant Sciences, University of Sheffield, Sheffield, UK.
authors.forename: Douglas G
authors.initials: DG
authors.lastname: Ibrahim
authors.forename: Terry
authors.initials: T
authors.lastname: Burke
authors.forename: Brad S
authors.initials: BS
authors.lastname: Ripley
authors.forename: Colin P
authors.initials: CP
authors.lastname: Osborne
mesh_terms: D002244:Carbon / Q000378:metabolism*; D018742:DNA, Chloroplast / Q000235:genetics; D019143:Evolution, Molecular; D009245:NADH Dehydrogenase / Q000235:genetics; D010788:Photosynthesis / Q000502:physiology*; D010802:Phylogeny; D010940:Plant Proteins / Q000235:genetics; D006109:Poaceae / Q000145:classification / Q000235:genetics* / Q000502:physiology
chemical_list: D018742:DNA, Chloroplast; D010940:Plant Proteins; D002244:Carbon; C489904:NdhF protein, plant; D009245:NADH Dehydrogenase