Motif Tool Manager: a web-based framework for motif discovery.
BACKGROUND
Motif Tool Manager is a web-based framework for comparing and combining different approaches to discover novel DNA motifs. It comes with a set of five well-known approaches to motif discovery. It provides an easy mechanism for adding new motif finding tools to the framework through a web-interface and a minimal setup of the tools on the server. Users can execute the tools through the web-based framework and compare results from such executions. The framework provides a basic mechanism for identifying the most similar motif candidates found by a majority of themotif finding tools.


BACKGROUND
http://cetus.cs.memphis.edu/motif
Phan
Vinhthuy
V
Department of Computer Science, The Bioinformatics Program and The W. Harry Feinstone Center for Genomics Research, The University of Memphis, Memphis, TN 38152, USA. vphan@memphis.edu
Furlotte
Nicholas A
NA
D000465:Algorithms; D004247:DNA / Q000737:chemistry; D020407:Internet; D017422:Sequence Analysis, DNA / Q000379:methods*; D012984:Software
D004247:DNA