DNAPlotter: circular and linear interactive genome visualization.
DNAPlotter is an interactive Java application for generating circular and linear representations of genomes. Making use of the Artemis libraries to provide a user-friendly method of loading in sequence files (EMBL, GenBank, GFF) as well as data from relational databases, it filters features of interest to display on separate user-definable tracks. It can be used to produce publication quality images for papers or web pages.


BACKGROUND
DNAPlotter is freely available (under a GPL licence) for download (for MacOSX, UNIX and Windows) at the Wellcome Trust Sanger Institute web sites: http://www.sanger.ac.uk/Software/Artemis/circular/
Carver
Tim
T
Wellcome Trust Sanger Institute, CB10 1SA and European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. artemis@sanger.ac.uk
Thomson
Nick
N
Bleasby
Alan
A
Berriman
Matthew
M
Parkhill
Julian
J
D019295:Computational Biology / Q000379:methods*; D016678:Genome / Q000235:genetics*; D012485:Salmonella typhi / Q000235:genetics; D012984:Software