title: DNAPlotter: circular and linear interactive genome visualization.
abstract: DNAPlotter is an interactive Java application for generating circular and linear representations of genomes. Making use of the Artemis libraries to provide a user-friendly method of loading in sequence files (EMBL, GenBank, GFF) as well as data from relational databases, it filters features of interest to display on separate user-definable tracks. It can be used to produce publication quality images for papers or web pages.
  
  
  BACKGROUND
  DNAPlotter is freely available (under a GPL licence) for download (for MacOSX, UNIX and Windows) at the Wellcome Trust Sanger Institute web sites: http://www.sanger.ac.uk/Software/Artemis/circular/
authors.affiliation: Wellcome Trust Sanger Institute, CB10 1SA and European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. artemis@sanger.ac.uk
authors.forename: Tim
authors.initials: T
authors.lastname: Carver
authors.forename: Nick
authors.initials: N
authors.lastname: Thomson
authors.forename: Alan
authors.initials: A
authors.lastname: Bleasby
authors.forename: Matthew
authors.initials: M
authors.lastname: Berriman
authors.forename: Julian
authors.initials: J
authors.lastname: Parkhill
mesh_terms: D019295:Computational Biology / Q000379:methods*; D016678:Genome / Q000235:genetics*; D012485:Salmonella typhi / Q000235:genetics; D012984:Software