title: Microcirculation and the physiome projects.
abstract: The Physiome projects comprise a loosely knit worldwide effort to define the Physiome through databases and theoretical models, with the goal of better understanding the integrative functions of cells, organs, and organisms. The projects involve developing and archiving models, providing centralized databases, and linking experimental information and models from many laboratories into self-consistent frameworks. Increasingly accurate and complete models that embody quantitative biological hypotheses, adhere to high standards, and are publicly available and reproducible, together with refined and curated data, will enable biological scientists to advance integrative, analytical, and predictive approaches to the study of medicine and physiology. This review discusses the rationale and history of the Physiome projects, the role of theoretical models in the development of the Physiome, and the current status of efforts in this area addressing the microcirculation.
authors.affiliation: Department of Bioengineering, University of Washington, Washington, Seattle, USA. jbb2@washington.edu
authors.forename: James B
authors.initials: JB
authors.lastname: Bassingthwaighte
mesh_terms: D000818:Animals; D035843:Biomedical Research / Q000458:organization & administration*; D019992:Databases as Topic; D006801:Humans; D033183:Interdisciplinary Communication; D020407:Internet; D019369:Life; D008833:Microcirculation / Q000502:physiology; D008954:Models, Biological; D008955:Models, Cardiovascular; D010829:Physiological Phenomena; D015203:Reproducibility of Results; D049490:Systems Biology / Q000379:methods / Q000458:organization & administration*