title: Use of polarized PC12 cells to monitor protein localization in the early biosynthetic pathway.
abstract: A prerequisite for understanding the cellular functions of an unknown protein is the establishment of its subcellular localization. As increasing numbers of novel proteins of the biosynthetic pathway are currently being identified, accessible new methods are required to facilitate their localization. Differentiating rat pheochromocytoma (PC12) cells reorganize their biosynthetic membrane compartments as they develop neurite-like processes. The authors recently showed that polarization of these cells involves the expansion of the intermediate compartment (IC) between the rough endoplasmic reticulum (RER) and the Golgi apparatus. Tubules emerging from the vacuolar parts of the IC move to the developing neurites accumulating in their growth cones, whereas the vacuoles, like RER and Golgi, remain in the cell body. Thus, polarized PC12 cells enhance the resolution for immunofluorescence microscopic mapping of protein localization in the early biosynthetic pathway. The authors also describe here a rapid cell fractionation protocol employing velocity sedimentation in iodixanol gradients that allows one-step separation of the pre-Golgi vacuoles, tubules, and RER.
authors.affiliation: Department of Biomedicine, University of Bergen, Bergen, Norway.
authors.forename: Ragna
authors.initials: R
authors.lastname: Sannerud
authors.forename: Michaël
authors.initials: M
authors.lastname: Marie
authors.forename: Bodil Berger
authors.initials: BB
authors.lastname: Hansen
authors.forename: Jaakko
authors.initials: J
authors.lastname: Saraste
mesh_terms: D000818:Animals; D002451:Cell Compartmentation; D002454:Cell Differentiation; D016764:Cell Polarity; D049109:Cell Proliferation; D002499:Centrifugation, Density Gradient; D005455:Fluorescent Antibody Technique; D008967:Molecular Biology / Q000379:methods*; D016716:PC12 Cells; D014176:Protein Biosynthesis; D021381:Protein Transport; D011506:Proteins / Q000378:metabolism*; D051381:Rats; D014283:Triiodobenzoic Acids
chemical_list: D011506:Proteins; D014283:Triiodobenzoic Acids; C044834:iodixanol