Genome-wide analysis of the effects of location and number of stress response elements on gene expression in Saccharomyces cerevisiae.
We analyzed the effects of the location and number of stress response elements (STREs) on gene expression in Saccharomyces cerevisiae. Genes containing STRE between 51 and 300 bp upstream from translational start codon tended to be up-regulated and genes with multiple STREs exhibited higher up-regulation under stress conditions.
Yoshikawa
Katsunori
K
Department of Bioinformatic Engineering, Graduate School of Information Science and Technology, Osaka University, 2-1 Yamadaoka, Suita, Osaka, Japan.
Furusawa
Chikara
C
Hirasawa
Takashi
T
Shimizu
Hiroshi
H
D001709:Biotechnology / Q000379:methods*; D003062:Codon; D015870:Gene Expression; D020869:Gene Expression Profiling; D015966:Gene Expression Regulation, Fungal; D005800:Genes, Fungal; D005821:Genetic Techniques; D016681:Genome, Fungal; D008957:Models, Genetic; D020411:Oligonucleotide Array Sequence Analysis; D009995:Osmosis; D020218:Response Elements; D012441:Saccharomyces cerevisiae / Q000235:genetics*; D012965:Sodium Chloride / Q000737:chemistry
D003062:Codon; D012965:Sodium Chloride