title: Autophagy and pattern recognition receptors in innate immunity.
abstract: Autophagy is a physiologically and immunologically controlled intracellular homeostatic pathway that sequesters and degrades cytoplasmic targets including macromolecular aggregates, cellular organelles such as mitochondria, and whole microbes or their products. Recent advances show that autophagy plays a role in innate immunity in several ways: (i) direct elimination of intracellular microbes by digestion in autolysosomes, (ii) delivery of cytosolic microbial products to pattern recognition receptors (PRRs) in a process referred to as topological inversion, and (iii) as an anti-microbial effector of Toll-like receptors and other PRR signaling. Autophagy eliminates pathogens in vitro and in vivo but, when aberrant due to mutations, contributes to human inflammatory disorders such as Crohn's disease. In this review, we examine these relationships and propose that autophagy is one of the most ancient innate immune defenses that has possibly evolved at the time of alpha-protobacteria-pre-eukaryote relationships, leading up to modern eukaryotic cell-mitochondrial symbiosis, and that during the metazoan evolution, additional layers of immunological regulation have been superimposed and integrated with this primordial innate immunity mechanism.
authors.affiliation: Department of Molecular Genetics and Microbiology, University of New Mexico Health Sciences Center, Albuquerque, NM 87131, USA.
authors.forename: Monica
authors.initials: M
authors.lastname: Delgado
authors.forename: Sudha
authors.initials: S
authors.lastname: Singh
authors.forename: Sergio
authors.initials: S
authors.lastname: De Haro
authors.forename: Sharon
authors.initials: S
authors.lastname: Master
authors.forename: Marisa
authors.initials: M
authors.lastname: Ponpuak
authors.forename: Christina
authors.initials: C
authors.lastname: Dinkins
authors.forename: Wojciech
authors.initials: W
authors.lastname: Ornatowski
authors.forename: Isabelle
authors.initials: I
authors.lastname: Vergne
authors.forename: Vojo
authors.initials: V
authors.lastname: Deretic
mesh_terms: D000818:Animals; D017951:Antigen Presentation / Q000276:immunology; D001343:Autophagy / Q000235:genetics / Q000276:immunology*; D003424:Crohn Disease / Q000235:genetics / Q000276:immunology; D016207:Cytokines / Q000235:genetics / Q000378:metabolism; D019143:Evolution, Molecular; D019204:GTP-Binding Proteins / Q000235:genetics / Q000276:immunology* / Q000378:metabolism; D006801:Humans; D007113:Immunity, Innate; D007239:Infections / Q000276:immunology; D020935:MAP Kinase Signaling System / Q000276:immunology; D008928:Mitochondria / Q000276:immunology; D053472:Nod Signaling Adaptor Proteins / Q000276:immunology / Q000378:metabolism*; D018417:Th1 Cells / Q000276:immunology / Q000378:metabolism; D018418:Th2 Cells / Q000276:immunology / Q000378:metabolism; D051193:Toll-Like Receptors / Q000276:immunology / Q000378:metabolism*
chemical_list: D016207:Cytokines; D053472:Nod Signaling Adaptor Proteins; D051193:Toll-Like Receptors; D019204:GTP-Binding Proteins; C513539:IRGM protein, human