Variation in the gene encoding Krüppel-like factor 7 influences body fat: studies of 14 818 Danes.
OBJECTIVE
KLF7 encodes Krüppel-like factor (KLF) 7, a member of the KLF family of transcription factors, initially shown to play important roles in cellular development and differentiation, and reported to be specifically involved in adipogenesis. Several single nucleotide polymorphisms (SNPs) have been identified in KLF7, of which the A-allele of rs2302870 has been associated with type 2 diabetes in a Japanese population; however, a possible association of KLF7 SNPs with obesity has not been investigated. We aimed to identify variation in the putative promoter region, the coding regions, exon/intron boundaries, and 3'-UTR of KLF7, and to examine identified variants in relation to obesity, type 2 diabetes, and related quantitative traits in Danish individuals.


METHODS
Identified variants were investigated for association with type 2 diabetes in 8777 individuals and with obesity in 14 818 individuals.


RESULTS
We identified four common SNPs in low pairwise linkage disequilibrium; three in the putative promoter region (-1119 G>A, -963 C>A (rs7568369), and -614 G>A) and IVS2+35092 A>C (rs2302870). We failed to confirm an association between rs2302870 and type 2 diabetes. Neither was rs7568369 associated with type 2 diabetes; however, the minor A-allele of rs7568369 protected against obesity (OR=0.90 (0.84-0.96), P=0.001) and in studies of quantitative traits (n=5,535) the variant associated with decreased body mass index (P=0.002) and waist circumference (P=0.003). The -1119 G>A and -614 G>A variants were not associated with obesity or type 2 diabetes.


CONCLUSIONS
We identified a novel association between the minor A-allele of KLF7 rs7568369 and protection against obesity in the Danish population.
Zobel
Dorit P
DP
Steno Diabetes Center, Niels Steensens Vej 2, DK-2820 Gentofte, Copenhagen, Denmark. dpaj@steno.dk
Andreasen
Camilla H
CH
Burgdorf
Kristoffer S
KS
Andersson
Ehm A
EA
Sandbaek
Annelli
A
Lauritzen
Torsten
T
Borch-Johnsen
Knut
K
Jørgensen
Torben
T
Maeda
Shiro
S
Nakamura
Yusuke
Y
Eiberg
Hans
H
Pedersen
Oluf
O
Pederse
Oluf
O
Hansen
Torben
T
D020413:3' Untranslated Regions / Q000235:genetics; D000368:Aged; D000483:Alleles; D050218:Body Fat Distribution; D001827:Body Height / Q000502:physiology; D015992:Body Mass Index; D001835:Body Weight / Q000502:physiology; D016022:Case-Control Studies; D003718:Denmark / Q000453:epidemiology; D003924:Diabetes Mellitus, Type 2 / Q000235:genetics / Q000378:metabolism; D005260:Female; D014644:Genetic Variation; D005838:Genotype; D006801:Humans; D051741:Kruppel-Like Transcription Factors / Q000235:genetics*; D008297:Male; D008875:Middle Aged; D009765:Obesity / Q000235:genetics / Q000378:metabolism; D050177:Overweight / Q000235:genetics / Q000378:metabolism; D011110:Polymorphism, Genetic / Q000235:genetics; D049629:Waist-Hip Ratio
D020413:3' Untranslated Regions; C480503:KLF7 protein, human; D051741:Kruppel-Like Transcription Factors