MatrixDB, a database focused on extracellular protein-protein and protein-carbohydrate interactions.
CONCLUSIONS
MatrixDB (http://matrixdb.ibcp.fr) is a database reporting mammalian protein-protein and protein-carbohydrate interactions involving extracellular molecules. It takes into account the full interaction repertoire of the extracellular matrix involving full-length molecules, fragments and multimers. The current version of MatrixDB contains 1972 interactions corresponding to 4412 experiments and involving 259 extracellular biomolecules.


BACKGROUND
MatrixDB is freely available at http://matrixdb.ibcp.fr
Chautard
Emilie
E
UMR 5086 CNRS-Université Lyon 1, 7 passage du Vercors, 69367 Lyon Cedex 07, France.
Ballut
Lionel
L
Thierry-Mieg
Nicolas
N
Ricard-Blum
Sylvie
S
D001665:Binding Sites; D002241:Carbohydrates / Q000737:chemistry*; D019295:Computational Biology / Q000379:methods; D003628:Database Management Systems; D030562:Databases, Protein; D005109:Extracellular Matrix / Q000737:chemistry; D016326:Extracellular Matrix Proteins / Q000737:chemistry* / Q000378:metabolism
D002241:Carbohydrates; D016326:Extracellular Matrix Proteins