title: A new library of HEMET model: Insulin effects on hepatic metabolism.
abstract: Prediction and simulation of cell culture behaviour, under different chemical and physical stimuli by a mathematical model, represent an innovative way to create a virtual cell laboratory, where it is possible to perform and optimize experimental protocol, saving time and money. In silico experiments permit to reproduce pathological and physiological situations and make toxicological tests. In this paper we introduce a new library of HEMET (HEpatocyte METabolism) software that allows the insulin effects on hepatic metabolism to be simulated. This new set of nonlinear differential equations, derived from biochemical reactions which involve this pancreatic hormone, allows the catabolites concentration in hepatic cell culture after insulin infusion to be predicted. The validation procedures were carried out using data obtained from specifically designed cell experiments and from literature. A user friendly interface allows to easily change model parameters, rate constants and inputs simulating a wide range of physiological and pathological scenarios.
authors.affiliation: Interdepartmental Research Center E. Piaggio, Faculty of Engineering, University of Pisa, Via Diotisalvi 2, 56126, Pisa, Italy.
authors.forename: A
authors.initials: A
authors.lastname: Cutrone
authors.forename: C
authors.initials: C
authors.lastname: De Maria
authors.forename: B
authors.initials: B
authors.lastname: Vinci
authors.forename: F
authors.initials: F
authors.lastname: Vozzi
authors.forename: A
authors.initials: A
authors.lastname: Ahluwalia
authors.forename: G
authors.initials: G
authors.lastname: Vozzi
mesh_terms: D000418:Albumins / Q000378:metabolism; D001686:Biological Phenomena; D045744:Cell Line, Tumor; D003198:Computer Simulation; D005227:Fatty Acids / Q000378:metabolism; D005947:Glucose / Q000378:metabolism; D006003:Glycogen / Q000378:metabolism; D022781:Hepatocytes / Q000378:metabolism*; D006801:Humans; D007328:Insulin / Q000378:metabolism*; D008099:Liver / Q000378:metabolism*; D008954:Models, Biological; D008962:Models, Theoretical; D010766:Phosphorylation; D012680:Sensitivity and Specificity; D012984:Software
chemical_list: D000418:Albumins; D005227:Fatty Acids; D007328:Insulin; D006003:Glycogen; D005947:Glucose