title: Biodegradation of trichloroethylene (TCE) by methanotrophic community.
abstract: Laboratory incubation experiments were carried out to assess the potential of methanotrophic culture for degrading TCE. Measurements of the growth rate and TCE degradation showed that the methanotrophs not only grew in presence of TCE but also degraded TCE. The rate of TCE degradation was found to be 0.19 ppm h(-1). The reverse transcriptase-PCR test was conducted to quantify expression of pmoA and mmoX genes. RT-PCR revealed expression of pmoA gene only. This observation provides evidence that the pmoA gene was functionally active for pMMO enzyme during the study. The diversity of the methanotrophs involved in TCE degradation was assessed by PCR amplification, cloning, restriction fragment length polymorphism and phylogenetic analysis of pmoA genes. Results suggested the occurrence of nine different phylotypes belonging to Type II methanotrophs in the enriched cultures. Out of the nine, five clustered with, genera Methylocystis and rest got clustered in to a separate group.
authors.affiliation: Department of Botany, Banaras Hindu University, Varanasi 221005, India.
authors.forename: Awadhesh K
authors.initials: AK
authors.lastname: Shukla
authors.forename: Pranjali
authors.initials: P
authors.lastname: Vishwakarma
authors.forename: S N
authors.initials: SN
authors.lastname: Upadhyay
authors.forename: Anil K
authors.initials: AK
authors.lastname: Tripathi
authors.forename: H C
authors.initials: HC
authors.lastname: Prasana
authors.forename: Suresh K
authors.initials: SK
authors.lastname: Dubey
mesh_terms: D001673:Biodegradation, Environmental; D044822:Biodiversity; D005798:Genes, Bacterial; D042083:Methylocystaceae / Q000145:classification / Q000235:genetics / Q000378:metabolism*; D008969:Molecular Sequence Data; D010802:Phylogeny; D012150:Polymorphism, Restriction Fragment Length; D020133:Reverse Transcriptase Polymerase Chain Reaction; D014241:Trichloroethylene / Q000378:metabolism*
chemical_list: D014241:Trichloroethylene