[Nucleotide sequence analysis of the NSP4 gene from group A rotaviruses isolated in Nizhni Novgorod].
The complete nucleotide sequences of the NSP4 gene from Russian isolates of Group A rotaviruses with different G[P] types obtained in Nizhni Novgorod have been first ascertained. They belong to their affiliation to three NSP4 (A, B, and C) of the 5 known genotypes. Eleven strains had NSP4 genotype. Phylogenetic analysis based on the complete nucleotide sequences of the NSP4 gene revealed the sequence homology of G1P[8] viruses with the strains circulating in Scandinavia and that of the G3 type viruses with the strains from South-Eastern Asia. The rotavirus strains G1, G3, G4, and P[8] demonstrated the homology with porcine rotavirus strains, while the strains G3P[6], G3P[9], and G2P[4] did the homology with bovine rotavirus strains. There was an unusual strain of human rotaviruses G3P[9] genetically related to feline rotaviruses.
Novikova
N A
NA
Ponomareva
N V
NV
Novikov
D V
DV
Prilipov
A G
AG
Epifanova
N V
NV
Golitsyna
L N
LN
D000818:Animals; D001483:Base Sequence; D002417:Cattle; D002648:Child; D005243:Feces / Q000821:virology; D006023:Glycoproteins / Q000737:chemistry / Q000235:genetics*; D006801:Humans; D008969:Molecular Sequence Data; D010802:Phylogeny; D012401:Rotavirus / Q000145:classification* / Q000235:genetics* / Q000302:isolation & purification; D012400:Rotavirus Infections / Q000453:epidemiology / Q000821:virology*; D012426:Russia / Q000453:epidemiology; D017423:Sequence Analysis, RNA; D014118:Toxins, Biological / Q000737:chemistry / Q000235:genetics*; D017361:Viral Nonstructural Proteins / Q000737:chemistry / Q000235:genetics*
D006023:Glycoproteins; C081369:NS28 protein, rotavirus; D014118:Toxins, Biological; D017361:Viral Nonstructural Proteins