title: Soil CO2 flux and photoautotrophic community composition in high-elevation, 'barren' soil.
abstract: Soil-dominated ecosystems, with little or no plant cover (i.e. deserts, polar regions, high-elevation areas and zones of glacial retreat), are often described as 'barren', despite their potential to host photoautotrophic microbial communities. In high-elevation, subnival zone soil (i.e. elevations higher than the zone of continuous vegetation), the structure and function of these photoautotrophic microbial communities remains essentially unknown. We measured soil CO(2) flux at three sites (above 3600 m) and used molecular techniques to determine the composition and distribution of soil photoautotrophs in the Colorado Front Range. Soil CO(2) flux data from 2002 and 2007 indicate that light-driven CO(2) uptake occurred on most dates. A diverse community of Cyanobacteria, Chloroflexi and eukaryotic algae was present in the top 2 cm of the soil, whereas these clades were nearly absent in deeper soils (2-4 cm). Cyanobacterial communities were composed of lineages most closely related to Microcoleus vaginatus and Phormidium murrayi, eukaryotic photoautotrophs were dominated by green algae, and three novel clades of Chloroflexi were also abundant in the surface soil. During the light hours of the 2007 snow-free measurement period, CO(2) uptake was conservatively estimated to be 23.7 g C m(-2) season(-1). Our study reveals that photoautotrophic microbial communities play an important role in the biogeochemical cycling of subnival zone soil.
authors.affiliation: Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, CO 80309-0334, USA.
authors.forename: Kristen R
authors.initials: KR
authors.lastname: Freeman
authors.forename: Monte Y
authors.initials: MY
authors.lastname: Pescador
authors.forename: Sasha C
authors.initials: SC
authors.lastname: Reed
authors.forename: Elizabeth K
authors.initials: EK
authors.lastname: Costello
authors.forename: Michael S
authors.initials: MS
authors.lastname: Robeson
authors.forename: Steven K
authors.initials: SK
authors.lastname: Schmidt
mesh_terms: D002245:Carbon Dioxide / Q000378:metabolism*; D041862:Chloroflexi / Q000145:classification / Q000302:isolation & purification* / Q000378:metabolism; D016000:Cluster Analysis; D003120:Colorado; D000458:Cyanobacteria / Q000145:classification / Q000302:isolation & purification* / Q000378:metabolism; D048028:DNA, Algal / Q000737:chemistry / Q000235:genetics; D004269:DNA, Bacterial / Q000737:chemistry / Q000235:genetics; D004275:DNA, Ribosomal / Q000737:chemistry / Q000235:genetics; D056890:Eukaryota / Q000145:classification / Q000302:isolation & purification* / Q000378:metabolism; D020459:Genes, rRNA; D008027:Light; D008969:Molecular Sequence Data; D010788:Photosynthesis; D010802:Phylogeny; D048030:RNA, Algal / Q000235:genetics; D012329:RNA, Bacterial / Q000235:genetics; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D012337:RNA, Ribosomal, 18S / Q000235:genetics; D017422:Sequence Analysis, DNA; D012689:Sequence Homology, Nucleic Acid; D012988:Soil Microbiology
chemical_list: D048028:DNA, Algal; D004269:DNA, Bacterial; D004275:DNA, Ribosomal; D048030:RNA, Algal; D012329:RNA, Bacterial; D012336:RNA, Ribosomal, 16S; D012337:RNA, Ribosomal, 18S; D002245:Carbon Dioxide