title: Sequence variation in the mitochondrial gene cytochrome c oxidase subunit I and prostate cancer in African American men.
abstract: BACKGROUND
  Previous studies have found associations between mitochondrial DNA (mtDNA) mutations and several cancer types. Recently, we found that mutations in the mtDNA gene cytochrome c oxidase subunit 1 (COI) were both linked to and associated with prostate cancer (PCa) in Caucasian men. Here we examine the association between COI mutations and PCa in African American men.
  
  
  METHODS
  The entire COI gene was directly sequenced in 132 PCa cases and 135 controls from the Flint Men's Health Study, a community-based sample of African American men with and without PCa. Associations between all variants and PCa were evaluated.
  
  
  RESULTS
  We identified 102 COI single nucleotide polymorphisms (SNPs), including 15 missense variants. Overall, the presence of one or more COI missense variants was not significantly associated with PCa. Individually, two SNPs (T6221C and T7389C) were significantly associated with prostate cancer (P < 0.05) and in strong linkage disequilibrium with each other (r(2) > 0.6).
  
  
  CONCLUSIONS
  Of the two significantly associated SNPs, one is a synonymous substitution and the other is part of the African-specific mitochondrial haplogroup (L). Additional research will be needed to determine the clinical relevance of these associations in African populations.
authors.affiliation: Department of Internal Medicine, University of Michigan Medical School, Ann Arbor, Michigan, USA.
authors.forename: Anna M
authors.initials: AM
authors.lastname: Ray
authors.forename: Kimberly A
authors.initials: KA
authors.lastname: Zuhlke
authors.forename: Albert M
authors.initials: AM
authors.lastname: Levin
authors.forename: Julie A
authors.initials: JA
authors.lastname: Douglas
authors.forename: Kathleen A
authors.initials: KA
authors.lastname: Cooney
authors.forename: John A
authors.initials: JA
authors.lastname: Petros
mesh_terms: D001741:Black or African American / Q000235:genetics*; D000368:Aged; D003576:Electron Transport Complex IV / Q000235:genetics*; D020022:Genetic Predisposition to Disease; D014644:Genetic Variation; D006239:Haplotypes; D006801:Humans; D015810:Linkage Disequilibrium; D008297:Male; D008875:Middle Aged; D008928:Mitochondria / Q000201:enzymology / Q000235:genetics; D020125:Mutation, Missense; D020641:Polymorphism, Single Nucleotide; D011471:Prostatic Neoplasms / Q000208:ethnology* / Q000235:genetics* / Q000378:metabolism
chemical_list: D003576:Electron Transport Complex IV