Synergy Disequilibrium Plots: graphical visualization of pairwise synergies and redundancies of SNPs with respect to a phenotype.
CONCLUSIONS
We present a visualization tool applied on genome-wide association data, revealing disease-associated haplotypes, epistatically interacting loci, as well as providing visual signatures of multivariate correlations of genetic markers with respect to a phenotype.


BACKGROUND
Freely available on the web at: (http://www.ee.columbia.edu/~anastas/sdplots).
Watkinson
John
J
Center for Computational Biology and Bioinformatics, Department of Electrical Engineering, Columbia University, New York, NY 10027, USA.
Anastassiou
Dimitris
D
D019295:Computational Biology / Q000379:methods*; D003196:Computer Graphics / Q000592:standards; D055106:Genome-Wide Association Study; D006239:Haplotypes; D010641:Phenotype; D020641:Polymorphism, Single Nucleotide / Q000235:genetics*; D012984:Software; D014584:User-Computer Interface