title: Multidrug resistance gene deficient (mdr1a-/-) mice have an altered caecal microbiota that precedes the onset of intestinal inflammation.
abstract: OBJECTIVE
  To compare caecal microbiota from mdr1a(-/-) and wild type (FVB) mice to identify differences in the bacterial community that could influence the intestinal inflammation.
  
  
  RESULTS
  Caecal microbiota of mdr1a(-/-) and FVB mice were evaluated at 12 and 25 weeks of age using denaturing gradient gel electrophoresis (DGGE) and quantitative real-time PCR. DGGE fingerprints of FVB and mdr1a(-/-) mice (with no intestinal inflammation) at 12 weeks revealed differences in the presence of DNA fragments identified as Bacteroides fragilis, B. thetaiotaomicron, B. vulgatus and an uncultured alphaproteobacterium. Escherichia coli and Acinetobacter sp. were only identified in DGGE profiles of mdr1a(-/-) mice at 25 weeks (with severe intestinal inflammation), which also had a lower number of total bacteria in the caecum compared with FVB mice at same age.
  
  
  CONCLUSIONS
  Differences found in the caecal microbiota of FVB and mdr1a(-/-) mice (12 weeks) suggest that the lack of Abcb1 transporters in intestinal cells due to the disruption of the mdr1a gene might lead to changes in the caecal microbiota. The altered microbiota along with the genetic defect could contribute to the development of intestinal inflammation in mdr1a(-/-) mice.
  
  
  CONCLUSIONS
  Differences in caecal microbiota of mdr1a(-/-) and FVB mice (12 weeks) suggest genotype specific colonization. The results provide evidence that Abcb1 transporters may regulate host interactions with commensal bacteria. Future work is needed to identify the mechanisms involved in this possible cross-talk between the host intestinal cells and microbiota.
authors.affiliation: Crop & Food Research, Palmerston North, New Zealand.
authors.forename: K
authors.initials: K
authors.lastname: Nones
authors.forename: B
authors.initials: B
authors.lastname: Knoch
authors.forename: Y E M
authors.initials: YE
authors.lastname: Dommels
authors.forename: G
authors.initials: G
authors.lastname: Paturi
authors.forename: C
authors.initials: C
authors.lastname: Butts
authors.forename: W C
authors.initials: WC
authors.lastname: McNabb
authors.forename: N C
authors.initials: NC
authors.lastname: Roy
mesh_terms: D020168:ATP Binding Cassette Transporter, Subfamily B, Member 1 / Q000235:genetics*; D000150:Acinetobacter / Q000302:isolation & purification; D020561:Alphaproteobacteria / Q000302:isolation & purification; D000818:Animals; D001419:Bacteria / Q000235:genetics* / Q000254:growth & development / Q000302:isolation & purification*; D001439:Bacteroides / Q000302:isolation & purification; D002432:Cecum / Q000382:microbiology*; D015169:Colony Count, Microbial; D016172:DNA Fingerprinting; D004591:Electrophoresis, Polyacrylamide Gel; D004926:Escherichia coli / Q000302:isolation & purification; D007249:Inflammation / Q000209:etiology; D007410:Intestinal Diseases / Q000209:etiology*; D051379:Mice; D018345:Mice, Knockout; D016133:Polymerase Chain Reaction / Q000379:methods; D012336:RNA, Ribosomal, 16S / Q000032:analysis / Q000235:genetics
chemical_list: D020168:ATP Binding Cassette Transporter, Subfamily B, Member 1; D012336:RNA, Ribosomal, 16S