title: Electrostatic control of the photoisomerization efficiency and optical properties in visual pigments: on the role of counterion quenching.
abstract: Hybrid QM(CASPT2//CASSCF/6-31G*)/MM(Amber) computations have been used to map the photoisomerization path of the retinal chromophore in Rhodopsin and explore the reasons behind the photoactivity efficiency and spectral control in the visual pigments. It is shown that while the electrostatic environment plays a central role in properly tuning the optical properties of the chromophore, it is also critical in biasing the ultrafast photochemical event: it controls the slope of the photoisomerization channel as well as the accessibility of the S(1)/S(0) crossing space triggering the ultrafast decay. The roles of the E113 counterion, the E181 residue, and the other amino acids of the protein pocket are explicitly analyzed: it appears that counterion quenching by the protein environment plays a key role in setting up the chromophore's optical properties and its photochemical efficiency. A unified scenario is presented that discloses the relationship between spectroscopic and mechanistic properties in rhodopsins and allows us to draw a solid mechanism for spectral tuning in color vision pigments: a tunable counterion shielding appears as the elective mechanism for L<-->M spectral modulation, while a retinal conformational control must dictate S absorption. Finally, it is suggested that this model may contribute to shed new light into mutations-related vision deficiencies that opens innovative perspectives for experimental biomolecular investigations in this field.
authors.affiliation: Dipartimento di Chimica G. Ciamician, Università di Bologna, via Selmi 2, Bologna I-40126, Italy.
authors.forename: Gaia
authors.initials: G
authors.lastname: Tomasello
authors.forename: Gloria
authors.initials: G
authors.lastname: Olaso-González
authors.forename: Piero
authors.initials: P
authors.lastname: Altoè
authors.forename: Marco
authors.initials: M
authors.lastname: Stenta
authors.forename: Luis
authors.initials: L
authors.lastname: Serrano-Andrés
authors.forename: Manuela
authors.initials: M
authors.lastname: Merchán
authors.forename: Giorgio
authors.initials: G
authors.lastname: Orlandi
authors.forename: Andrea
authors.initials: A
authors.lastname: Bottoni
authors.forename: Marco
authors.initials: M
authors.lastname: Garavelli
mesh_terms: D000818:Animals; D001665:Binding Sites; D002417:Cattle; D055253:Color Vision; D019295:Computational Biology / Q000379:methods*; D018360:Crystallography, X-Ray; D007477:Ions / Q000737:chemistry*; D007536:Isomerism; D008958:Models, Molecular; D009154:Mutation; D010777:Photochemistry; D011522:Protons; D011789:Quantum Theory; D012160:Retina / Q000378:metabolism; D012243:Rhodopsin / Q000737:chemistry* / Q000235:genetics*; D055672:Static Electricity; D013816:Thermodynamics
chemical_list: D007477:Ions; D011522:Protons; D012243:Rhodopsin