TRABAS: a database for transcription regulation by ABA signaling.
The effects of abscisic acid (ABA) induction on Arabidopsis thaliana transcriptome have been investigated by various expression studies. We have assembled and analyzed data from available expression studies related to ABA signaling in Arabidopsis along with other available microarray data, functional annotations and information related to occurrence of cis-regulatory elements in promoters of Arabidopsis genes in a database called TRABAS. TRABAS is expected to provide a simple, user-friendly platform to facilitate the study of different aspects of ABA mediated transcription regulation and is freely available at http://www.bioinformatics.org/trabas/.
Choudhury
Ananyo
A
Department of Biophysics, Molecular Biology & Bioinformatics, University of Calcutta, 92, APC Road, Kolkata 700009, India. ananyo.c@gmail.com
Lahiri
Ansuman
A
D000040:Abscisic Acid / Q000378:metabolism*; D017360:Arabidopsis / Q000235:genetics; D029681:Arabidopsis Proteins / Q000145:classification / Q000235:genetics; D030541:Databases, Genetic; D018506:Gene Expression Regulation, Plant / Q000235:genetics*; D015398:Signal Transduction; D014158:Transcription, Genetic / Q000235:genetics*; D015854:Up-Regulation
D029681:Arabidopsis Proteins; D000040:Abscisic Acid