Donghicola xiamenensis sp. nov., a marine bacterium isolated from seawater of the Taiwan Strait in China.
A Gram-negative, ovoid rod-shaped bacterium that lacked bacteriochlorophyll a, designated strain Y-2(T), was isolated from seawater of the Taiwan Strait, China. The strain was oxidase- and catalase-positive, and reduced nitrate to nitrite. Optimal growth occurred at around pH 7.0 and 25 degrees C in the presence of 1-3 % (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain Y-2(T) belonged to the class Alphaproteobacteria and formed a coherent cluster with Donghicola eburneus SW-277(T) (96.2 % sequence similarity). The major whole-cell fatty acid was C(18 : 1)omega7c (75.42 %). Other characteristic fatty acids were C(18 : 0) (9.16 %) and C(16 : 0) (7.32 %). The DNA G+C content of strain Y-2(T) was 62.4 mol%. Therefore, based on phenotypic properties, phylogeny and genomic data, strain Y-2(T) should be placed in the genus Donghicola as representing a novel species, for which the name Donghicola xiamenensis sp. nov. is proposed. The type strain is Y-2(T) (=MCCC 1A00107(T)=LMG 24574(T)=CGMCC 1.7081(T)).
Tan
Tianfeng
T
Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration, Xiamen 361005, PR China.
Wang
Baojiang
B
Shao
Zongze
Z
D015373:Bacterial Typing Techniques; D001482:Base Composition; D002681:China; D004269:DNA, Bacterial / Q000032:analysis; D004275:DNA, Ribosomal / Q000032:analysis; D005227:Fatty Acids / Q000032:analysis; D020459:Genes, rRNA; D008969:Molecular Sequence Data; D010641:Phenotype; D010802:Phylogeny; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D041902:Rhodobacteraceae / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification / Q000502:physiology; D012623:Seawater / Q000382:microbiology*; D017422:Sequence Analysis, DNA; D013045:Species Specificity
D004269:DNA, Bacterial; D004275:DNA, Ribosomal; D005227:Fatty Acids; D012336:RNA, Ribosomal, 16S