title: Comparative theoretical and experimental study of the radiation-induced decomposition of glycine.
abstract: The radiation-induced decomposition of glycine is studied using a combination of near-edge X-ray absorption fine structure (NEXAFS) measurements and DFT calculations. The measured spectra show strong dose- or time-dependent effects consistent with a complex, multistep decomposition. Principal component analysis was used to determine the number of distinct molecules that were needed to explain the observed changes in the measured spectra, and the emerging absorption features are assigned to various product molecules through comparison with simulated spectra of several model compounds. It is clear from the experiment that the major effect of soft X-ray irradiation is the fragmentation of the molecule, primarily at the carbonyl sites. Peptide formation is shown to occur under irradiation; a condensation reaction initiated by the removal of a carbonyl oxygen is the proposed mechanism. This study utilizes a novel approach to the study of radiation damage that can occur during measurements and suggests that it may be possible to use simulated model spectra to correct for these effects in measured spectra.
authors.affiliation: Department of Physics and Engineering Physics, University of Saskatchewan, 116 Science Place, Saskatoon, Saskatchewan, S7N 5E2, Canada. regan.wilks@usask.ca
authors.forename: R G
authors.initials: RG
authors.lastname: Wilks
authors.forename: J B
authors.initials: JB
authors.lastname: MacNaughton
authors.forename: H-B
authors.initials: HB
authors.lastname: Kraatz
authors.forename: T
authors.initials: T
authors.lastname: Regier
authors.forename: R I R
authors.initials: RI
authors.lastname: Blyth
authors.forename: A
authors.initials: A
authors.lastname: Moewes
mesh_terms: D000042:Absorption; D005998:Glycine / Q000737:chemistry*; D011789:Quantum Theory; D011827:Radiation; D013057:Spectrum Analysis
chemical_list: D005998:Glycine