title: A role for ubiquitin in the clearance of nonfunctional rRNAs.
abstract: Quality control mechanisms operate in various steps of ribosomal biogenesis to ensure the production of functional ribosome particles. It was reported previously that mature ribosome particles containing nonfunctional mutant rRNAs are also recognized and selectively removed by a cellular quality control system (nonfunctional rRNA decay [NRD]). Here, we show that the NRD of 25S rRNA requires a ubiquitin E3 ligase component Rtt101p and its associated protein Mms1p, identified previously as factors involved in DNA repair. We revealed that a group of proteins associated with nonfunctional ribosome particles are ubiquitinated in a Rtt101-Mms1-dependent manner. 25S NRD was disrupted when ubiquitination was inhibited by the overexpression of modified ubiquitin molecules, demonstrating a direct role for ubiquitin in this pathway. These results uncovered an unexpected connection between DNA repair and the quality control of rRNAs. Our findings support a model in which responses to DNA and rRNA damages are triggered by a common ubiquitin ligase complex during genotoxic stress harmful to both molecules.
authors.affiliation: Institute for Virus Research, Kyoto University, Kyoto, Japan.
authors.forename: Kotaro
authors.initials: K
authors.lastname: Fujii
authors.forename: Makoto
authors.initials: M
authors.lastname: Kitabatake
authors.forename: Tomoko
authors.initials: T
authors.lastname: Sakata
authors.forename: Atsumi
authors.initials: A
authors.lastname: Miyata
authors.forename: Mutsuhito
authors.initials: M
authors.lastname: Ohno
mesh_terms: D044842:Cullin Proteins / Q000378:metabolism; D003593:Cytoplasm / Q000378:metabolism*; D009154:Mutation; D020871:RNA Stability / Q000502:physiology*; D012335:RNA, Ribosomal / Q000378:metabolism*; D054683:Ribosome Subunits, Large, Eukaryotic / Q000378:metabolism; D012441:Saccharomyces cerevisiae / Q000201:enzymology / Q000254:growth & development / Q000378:metabolism*; D029701:Saccharomyces cerevisiae Proteins / Q000378:metabolism; D025801:Ubiquitin / Q000378:metabolism*
chemical_list: D044842:Cullin Proteins; C530190:Mms1 protein, S cerevisiae; D012335:RNA, Ribosomal; C476451:RTT101 protein, S cerevisiae; D029701:Saccharomyces cerevisiae Proteins; D025801:Ubiquitin; C065039:RNA, ribosomal, 25S