GeneSet2miRNA: finding the signature of cooperative miRNA activities in the gene lists.
GeneSet2miRNA is the first web-based tool which is able to identify whether or not a gene list has a signature of miRNA-regulatory activity. As input, GeneSet2miRNA accepts a list of genes. As output, a list of miRNA-regulatory models is provided. A miRNA-regulatory model is a group of miRNAs (single, pair, triplet or quadruplet) that is predicted to regulate a significant subset of genes from the submitted list. GeneSet2miRNA provides a user friendly dialog-driven web page submission available for several model organisms. GeneSet2miRNA is freely available at http://mips.helmholtz-muenchen.de/proj/gene2mir/.
Helmholtz Zentrum München - German Research Center for Environmental Health (GmbH), Institute for Bioinformatics and Systems Biology, Ingolstädter Landstrasse 1, D-85764 Neuherberg, Germany. a.antonov@helmholtz-muenchen.de
Alexey V
AV
Antonov
Sabine
S
Dietmann
Philip
P
Wong
Dominik
D
Lutter
Hans W
HW
Mewes
D000818:Animals; D005786:Gene Expression Regulation; D005796:Genes; D006801:Humans; D020407:Internet; D051379:Mice; D035683:MicroRNAs / Q000378:metabolism*; D051381:Rats; D012984:Software
D035683:MicroRNAs