Questioning our perceptions about evolution of biodegradative enzymes.
A century of biodegradation and natural product chemistry research has provided the backdrop for more deeply understanding the evolution of new degradative enzymes. Natural products serve as substrates and select for enzymes that may later act on industrial chemicals via analogous mechanisms. Enzymes that work on a range of substrates are said to be catalytically promiscuous. Studies are advancing with the development of tools to quantitatively assess catalytic promiscuity. Moreover, the role of catalytic promiscuity in evolution can now be studied by looking at genome-wide changes and their effects on cell survival. The expansion of public databases dealing with chemical compounds and metabolic reactions facilitates this research and now allows for the computational prediction of biodegradative metabolism.
Wackett
Lawrence P
LP
Department of Biochemistry, Molecular Biology and Biophysics and BioTechnology Institute, University of Minnesota, St. Paul, MN 551088, USA. wacke003@umn.edu
D001426:Bacterial Proteins / Q000235:genetics* / Q000378:metabolism*; D001673:Biodegradation, Environmental; D001711:Biotransformation; D004798:Enzymes / Q000235:genetics* / Q000378:metabolism*; D019143:Evolution, Molecular
D001426:Bacterial Proteins; D004798:Enzymes