title: RNA secondary structure analysis using the Vienna RNA package.
abstract: This unit documents how to use the Vienna RNA package for RNA secondary structure analysis. Possible tasks include structure prediction for single sequences, prediction of consensus structures, prediction of RNA-RNA interactions, and sequence design.
authors.affiliation: University of Vienna-Institute of Theoretical Chemistry, Vienna, Austria.
authors.forename: Ivo L
authors.initials: IL
authors.lastname: Hofacker
mesh_terms: D000465:Algorithms; D001483:Base Sequence; D008969:Molecular Sequence Data; D009690:Nucleic Acid Conformation; D012313:RNA / Q000737:chemistry*; D017423:Sequence Analysis, RNA / Q000379:methods; D012984:Software
chemical_list: D012313:RNA