title: Reordering contigs of draft genomes using the Mauve aligner.
abstract: CONCLUSIONS
  Mauve Contig Mover provides a new method for proposing the relative order of contigs that make up a draft genome based on comparison to a complete or draft reference genome. A novel application of the Mauve aligner and viewer provides an automated reordering algorithm coupled with a powerful drill-down display allowing detailed exploration of results.
  
  
  BACKGROUND
  The software is available for download at http://gel.ahabs.wisc.edu/mauve.
authors.affiliation: Genome Evolution Laboratory, University of Wisconsin-Madison, 425G Henry Mall Suite 4400V, Madison, WI 53706, USA. rissman@wisc.edu
authors.forename: Anna I
authors.initials: AI
authors.lastname: Rissman
authors.forename: Bob
authors.initials: B
authors.lastname: Mau
authors.forename: Bryan S
authors.initials: BS
authors.lastname: Biehl
authors.forename: Aaron E
authors.initials: AE
authors.lastname: Darling
authors.forename: Jeremy D
authors.initials: JD
authors.lastname: Glasner
authors.forename: Nicole T
authors.initials: NT
authors.lastname: Perna
mesh_terms: D000465:Algorithms; D020451:Contig Mapping; D016678:Genome; D016415:Sequence Alignment / Q000379:methods*; D017422:Sequence Analysis, DNA / Q000379:methods; D012984:Software