title: Investigations into peach seedling stunting caused by a replant soil.
abstract: Replant diseases often occur when pome and stone fruits are grown in soil that had previously been planted with the same or similar plant species. They typically lead to reductions in plant growth, crop yield and production duration. In this project, greenhouse assays were used to identify a peach orchard soil that caused replant disease symptoms. Biocidal treatments of this soil led to growth increases of Nemaguard peach seedlings. In addition, plants grown in as little as 1% of the replant soil exhibited reduced plant growth. These results suggest that the disease etiology has a biological component. Analysis of roots from plants exhibiting various levels of replant disease symptoms showed little difference in the amounts of PCR-amplified bacterial or fungal rRNA genes. However, analysis using a stramenopile-selective PCR assay showed that rRNA genes from this taxon were generally more abundant in plants with the smallest top weights. Nucleotide sequence analysis of these genes identified several phylotypes belonging to Bacillariophyta, Chrysophyceae, Eustigmatophyceae, Labyrinthulida, Oomycetes, Phaeophyceae and Synurophyceae. Sequence-selective quantitative PCR assays targeting four of the most abundant phylotypes showed that both diatoms (Sellaphora spp.) and an oomycete (Pythium ultimum) were negatively associated with plant top weights.
authors: Department of Plant Pathology and Microbiology, University of California, Riverside, CA 92521, USA.
authors: Elizabeth
authors: E
authors: Bent
authors: Angelo
authors: A
authors: Loffredo
authors: Jiue-In
authors: JI
authors: Yang
authors: Michael V
authors: MV
authors: McKenry
authors: Jörn Ole
authors: JO
authors: Becker
authors: James
authors: J
authors: Borneman
mesh_terms: D000818:Animals; D001419:Bacteria / Q000187:drug effects / Q000235:genetics / Q000302:isolation & purification; D004202:Disinfectants / Q000494:pharmacology; D020459:Genes, rRNA; D009348:Nematoda; D009868:Oomycetes / Q000187:drug effects / Q000235:genetics / Q000302:isolation & purification; D000459:Phaeophyceae / Q000187:drug effects / Q000235:genetics / Q000302:isolation & purification; D010802:Phylogeny; D010935:Plant Diseases / Q000382:microbiology*; D018517:Plant Roots / Q000382:microbiology; D027861:Prunus / Q000254:growth & development / Q000382:microbiology*; D048030:RNA, Algal / Q000302:isolation & purification; D012329:RNA, Bacterial / Q000302:isolation & purification; D012331:RNA, Fungal / Q000302:isolation & purification; D036226:Seedlings / Q000254:growth & development* / Q000382:microbiology; D017422:Sequence Analysis, DNA; D012987:Soil / Q000032:analysis; D012988:Soil Microbiology
chemical_list: D004202:Disinfectants; D048030:RNA, Algal; D012329:RNA, Bacterial; D012331:RNA, Fungal; D012987:Soil