title: Dokdonella soli sp. nov., a gammaproteobacterium isolated from soil.
abstract: An aerobic, Gram-negative, yellow-coloured, rod-shaped bacterial strain, designated KIS28-6T, was isolated from soil from Ulleung, an island located in the East Sea of Korea. A phylogenetic analysis revealed that strain KIS28-6T was a member of the genus Dokdonella, having 16S rRNA gene sequence similarities of 98.1 and 96.9% with respect to Dokdonella fugitiva CIP 108692T and Dokdonella koreensis DSM 17203T, respectively. Strain KIS28-6T showed DNA-DNA hybridization values of 38 and 32% with respect to D. fugitiva CIP 108692T and D. koreensis DSM 17203T, respectively. The major fatty acids (>10%) were iso-C17:1omega9c (35.7%), iso-C17:0 (26.9%) and iso-C15:0 (11.7%), the major respiratory quinone was Q-8 and the DNA G+C content was 73.0 mol%. On the basis of the results obtained in this polyphasic taxonomic analysis, strain KIS28-6T represents a novel species of the genus Dokdonella, for which the name Dokdonella soli sp. nov. is proposed. The type strain is KIS28-6T (=KACC 12741T =JCM 15421T).
authors: Korean Agricultural Culture Collection (KACC), National Agrobiodiversity Center, Rural Development Administration (RDA), Suwon 441-707, Republic of Korea.
authors: Seung-Hee
authors: SH
authors: Yoo
authors: Hang-Yeon
authors: HY
authors: Weon
authors: Rangasamy
authors: R
authors: Anandham
authors: Byung-Yong
authors: BY
authors: Kim
authors: Seung-Beom
authors: SB
authors: Hong
authors: Young-Ah
authors: YA
authors: Jeon
authors: Bon-Sung
authors: BS
authors: Koo
authors: Soon-Wo
authors: SW
authors: Kwon
mesh_terms: D000332:Aerobiosis; D015373:Bacterial Typing Techniques; D001482:Base Composition; D016000:Cluster Analysis; D004269:DNA, Bacterial / Q000737:chemistry / Q000235:genetics; D004275:DNA, Ribosomal / Q000737:chemistry / Q000235:genetics; D005227:Fatty Acids / Q000032:analysis; D007723:Korea; D008969:Molecular Sequence Data; D009693:Nucleic Acid Hybridization; D010802:Phylogeny; D010860:Pigments, Biological / Q000096:biosynthesis; D011809:Quinones / Q000032:analysis; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D017422:Sequence Analysis, DNA; D012988:Soil Microbiology; D044166:Xanthomonadaceae / Q000737:chemistry / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification*
chemical_list: D004269:DNA, Bacterial; D004275:DNA, Ribosomal; D005227:Fatty Acids; D010860:Pigments, Biological; D011809:Quinones; D012336:RNA, Ribosomal, 16S