Capillary zone electrophoresis with field enhanced sample stacking as a tool for targeted metabolome analysis of adenine nucleotides and coenzymes in Paracoccus denitrificans.
The main aim of this work was to demonstrate the applicability of capillary zone electrophoresis in combination with field enhanced sample stacking in targeted metabolome analyses of adenine nucleotides--AMP, ADP, ATP, coenzymes NAD(+), NADP(+) and their reduced forms in Paracoccus denitrificans. Sodium carbonate/hydrogencarbonate buffer (100 mM, pH 9.6) with the addition of beta-CD at a concentration of 10 mM was found to be an effective BGE for their separation within 20 min. Besides this, special attention was paid to the development of the procedure for the extraction of specific metabolites from the bacterium P. denitrificans. This procedure was not only optimised to achieve the highest metabolite yields but also to obtain a sample that was fully compatible with the online preconcetration strategy used. The developed methodology was finally applied in a study of the bacterium P. denitrificans at various stages of the active respiratory chain.
Musilová
Jindra
J
Department of Biochemistry, Faculty of Science, Masaryk University, Brno, Czech Republic.
Sedlácek
Vojtech
V
Kucera
Igor
I
Glatz
Zdenek
Z
D000227:Adenine Nucleotides / Q000032:analysis / Q000378:metabolism*; D003067:Coenzymes / Q000032:analysis / Q000378:metabolism*; D019075:Electrophoresis, Capillary / Q000295:instrumentation / Q000379:methods*; D055442:Metabolome; D010231:Paracoccus denitrificans / Q000737:chemistry / Q000201:enzymology / Q000378:metabolism*; D013997:Time Factors
D000227:Adenine Nucleotides; D003067:Coenzymes