title: HI: haplotype improver using paired-end short reads.
abstract: CONCLUSIONS
  We present a program to improve haplotype reconstruction by incorporating information from paired-end reads, and demonstrate its utility on simulated data. We find that given a fixed coverage, longer reads (implying fewer of them) are preferable.
  
  
  BACKGROUND
  The executable and user manual can be freely downloaded from ftp://ftp.sanger.ac.uk/pub/zn1/HI.
authors: The Wellcome Trust Sanger Institute, Hinxton, Cambs, UK. ql2@sanger.ac.uk
authors: Quan
authors: Q
authors: Long
authors: Daniel
authors: D
authors: MacArthur
authors: Zemin
authors: Z
authors: Ning
authors: Chris
authors: C
authors: Tyler-Smith
mesh_terms: D000465:Algorithms; D019295:Computational Biology / Q000379:methods*; D030541:Databases, Genetic; D006239:Haplotypes; D008969:Molecular Sequence Data; D016415:Sequence Alignment; D017422:Sequence Analysis, DNA; D012984:Software